Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1119 ATGTACGGCTCCATGAATGTCCCCAATCAGATCCCAGCTACCGAAGACAACGACGGTGACGCCCCCGACTCCGTCGACAACCACCATCACCCCATTCATTACAATTCTCACGGCCTCGACGACGGTGCTGGTGGAGTCGTTGAAGATGTCTCCGCCGAGACCGTGTACGTCTCCGGTGGCGGAGCCCCTGACATGTCTATCCAACCCTGCGAAGATTCCAGCCAGCTCACGCTCTCGTTTCGTGGCCAAGTGCAAGCGGTGTTGTTACTGTTGGGAGGATGTGAAGTGGCATCCTCGGGTTCGCAATGTGCGGAGATATCGCCTCAGAATCAACGGGGTGCAGTGGAATTTCCCGGAAGGTGCAATGAACCACATCGAGTGGCATCGTTGAACAGGTTCCGGCAGAAGAGGAAAGAGCGATGCTTTGATAAGAAAGTTAGATATAGTGTACGTCAAGAAGTTGCACTCAGGATGCAGCGTAATAAGGGTCAATTTACTTCAGCTAAGAAACAAGATGGAGGAAATAGTTGTGGTTCAGACCAAGAGTCAGTTCAAGATGCTATTCAATCAGAAACCTCATGCACACACTGTGGCATTAGCTCAAAATCCACCCCAATGATGCGGAGAGGACCATCTGGTCCAAGGTCACTTTGTAATGCTTGTGGGCTTTTTTGGTCAAATAGGGGTACAATGAGGGACCTCTGCAAGAGAAACCAGGAACATGTTCTTGCACTACCCGAGCCAGTTGATGAAGGTAACAACTCAGCCGGTCGGACTGCCATCCCGGAAAATAACAATGTTGCTACTTTCTCTGAACATGATAATGTGGCTTTGGCGTCGGCATCTGATCGATGA 855 0.5041 MYGSMNVPNQIPATEDNDGDAPDSVDNHHHPIHYNSHGLDDGAGGVVEDVSAETVYVSGGGAPDMSIQPCEDSSQLTLSFRGQVQAVLLLLGGCEVASSGSQCAEISPQNQRGAVEFPGRCNEPHRVASLNRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSAKKQDGGNSCGSDQESVQDAIQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWSNRGTMRDLCKRNQEHVLALPEPVDEGNNSAGRTAIPENNNVATFSEHDNVALASASDR* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1119 284 MobiDBLite consensus disorder prediction 247 284 - -
Aev08g1119 284 MobiDBLite consensus disorder prediction 1 30 - -
Aev08g1119 284 Pfam GATA zinc finger 194 231 IPR000679 GO:0006355|GO:0043565
Aev08g1119 284 ProSiteProfiles CCT domain profile. 126 168 IPR010402 GO:0005515
Aev08g1119 284 Gene3D - 185 242 IPR013088 GO:0006355|GO:0008270
Aev08g1119 284 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 189 239 - -
Aev08g1119 284 Pfam CCT motif 126 168 IPR010402 GO:0005515
Aev08g1119 284 ProSitePatterns GATA-type zinc finger domain. 194 221 IPR000679 GO:0006355|GO:0043565
Aev08g1119 284 PANTHER GATA TRANSCRIPTION FACTOR 25 20 256 - -
Aev08g1119 284 PANTHER GATA TRANSCRIPTION FACTOR 28 20 256 IPR045280 GO:0006355
Aev08g1119 284 MobiDBLite consensus disorder prediction 257 284 - -
Aev08g1119 284 SMART GATA_3 188 241 IPR000679 GO:0006355|GO:0043565
Aev08g1119 284 ProSiteProfiles GATA-type zinc finger domain profile. 188 246 IPR000679 GO:0006355|GO:0043565
Aev08g1119 284 CDD ZnF_GATA 193 239 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1119 Aev-Chr8 6842534 6845795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1119 68 279 Tify Gene Family AT4G24470 54.741 1.62e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev08g1119 CCT 5.3e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1119 - - pvu:PHAVU_008G182900g 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1119 08 6842534 6845795 Aev08g1119 08 6842534 6845795 ECH