Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1118 ATGTACGGCTCCATGAACGTCCCCGACCAGATCCCCGACGCCGAAGACAACGGCGGCGCCGCCCCCGACTCCGTGGACAACCACCACCACCACATTCATTACAATTCTCATGGCCTTGACGACGGTGCCGGTGGAGTCGTCGATGACGTCTCAGCTGACACGGTGTACGTCTCCGGCGGCGGAGCCCCCGACATGTCCATCCAGCCCTGCGAAGATTCCAGCCAGCTCACTCTCTCGTTTCGTGGCCAAGTTCAAGCGGTGTTGTTACTGTTGGGAGGGTGTGAAATGCCTTCCTCAGGTTCGCAAAGTGCGGAGATGTCGCCTCAGAATCAGAGGGGTGCAATTGAATTTCCTGCAAGGTGCGATCAGCCACATCGAGCGGCATCATTGAGTAGGTTCCGGCAGAAGAGGAAAGAGCGATGCTTTGATAAGAAAGTTAGATATAGTGTCCGTCAAGAAGTTGCACTCAGGATGCAACGTAATAAGGGTCAATTCACTTCAGCTAAGAAATATGATGGAGGTAATAGTTGTGGTTCAGACCAAGAGTCAGTTCAAGATGCTGTTCAATCAGAAACCTCATGTACACACTGTGGCATAAGTTCTAAATCCACTCCAATGATGCGGAGAGGGCCTTCTGGTCCAAGATCACTTTGCAACGCTTGTGGGCTTTTTTGGTCTAACCGGGGAACTTTGAGGGACCTTTCCAAGAGAAGCCAGGAACATGCTCTTGCACCACCCGAGCAAGTTGGTGAAGGTAACAACTCAGACGGCCAGACTGCCATTCCGGGAAATAACAGTGTTGCTACTTTCTCTGAAAATGATAACGCGGCTTTGGCATTAGATCGATGA 849 0.5159 MYGSMNVPDQIPDAEDNGGAAPDSVDNHHHHIHYNSHGLDDGAGGVVDDVSADTVYVSGGGAPDMSIQPCEDSSQLTLSFRGQVQAVLLLLGGCEMPSSGSQSAEMSPQNQRGAIEFPARCDQPHRAASLSRFRQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSAKKYDGGNSCGSDQESVQDAVQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWSNRGTLRDLSKRSQEHALAPPEQVGEGNNSDGQTAIPGNNSVATFSENDNAALALDR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1118 282 SMART GATA_3 188 241 IPR000679 GO:0006355|GO:0043565
Aev08g1118 282 ProSiteProfiles CCT domain profile. 126 168 IPR010402 GO:0005515
Aev08g1118 282 PANTHER GATA TRANSCRIPTION FACTOR 25 21 256 - -
Aev08g1118 282 PANTHER GATA TRANSCRIPTION FACTOR 28 21 256 IPR045280 GO:0006355
Aev08g1118 282 MobiDBLite consensus disorder prediction 251 273 - -
Aev08g1118 282 MobiDBLite consensus disorder prediction 237 282 - -
Aev08g1118 282 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 191 239 - -
Aev08g1118 282 Gene3D - 185 243 IPR013088 GO:0006355|GO:0008270
Aev08g1118 282 ProSitePatterns GATA-type zinc finger domain. 194 221 IPR000679 GO:0006355|GO:0043565
Aev08g1118 282 ProSiteProfiles GATA-type zinc finger domain profile. 188 246 IPR000679 GO:0006355|GO:0043565
Aev08g1118 282 MobiDBLite consensus disorder prediction 1 32 - -
Aev08g1118 282 Pfam GATA zinc finger 194 230 IPR000679 GO:0006355|GO:0043565
Aev08g1118 282 Pfam CCT motif 126 168 IPR010402 GO:0005515
Aev08g1118 282 CDD ZnF_GATA 193 239 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1118 Aev-Chr8 6837625 6841246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1118 68 244 Tify Gene Family AT4G24470 60.847 2.20e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev08g1118 CCT 2.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1118 - - pvu:PHAVU_008G182900g 357.836