Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1109 ATGACAATGCCGGAAAAGAAGCCTAAGAAGGTATCTTTCACGGAACGTGACGCTGCTACACTCACACAAAGGTATGATGCAACAACGGTGCTGACGTTGCTTCAGGAAGTGGCGCAGTATTCTGAAGCGAAGATTGATTGGAAAGAGTTAGTGAAGAAAACCTCAACTGGGATTTCTAGTGCGAGGGAATATCAGATGCTATGGCGACACCTGGCGTACCATGACGCCCTTTCTGATAATCTGGAAGACGGTGCTGAGCCTCTGGATGATGATAGTGACCTAGAATGTGAGCTTGAAGCATTACCGCCTGTTGGTGTTGAATCAGCAGCAGAGGCTGCAGCATGTGTGAAGGTAATGATTGCTTCTCATTCGCTGAGTGATTCAACCCCTACTAGCTCAACAATTGAGGCTCCACTGACTATAAATGTTCCAGTTCTCCATTCATCCGGAACTCCTAACGAAAGTTCACAGTCCTCTGATTTGATGCATGGGACGAACATTATTTTCCCAGTTACTGTTCAGAGACAAACACTCCCAACTGTGTCATCATCAGATGGCTTAGAATCCAAGGGAACGGGTGGTGGCAACATGGCTTCCAAAAGAAAAAGAACAGCATGGTCAGAGGAAGAAGACAAACAACTACGAGCTGCTGTTCAAAGATGGGGCGAAGGGAATTGGGCTACCATGGTAAAAGATGACAACTTTCCTGTTAAGAGAAGTCCAACACAATTGGCTCAGAGGTGGAGCGTTTTACGAAAGAAAGATGGAAGTACCAATTCTGGAACCATCTTGAGCAGCACACCTTATACTACTGCTGAACAACTGGCAACTCGCCACTCATTATCGCTAGCTCTTGATATGCCATTCAAAAAGTTATCTGCTCCTGGAATGACCAATCAGGGTAGGACACCCTTGAATCCACCAAGTAAAAACCAAGTGCAGCGTACTACAAGTGAGGCTTTGACGACTGCTCACCCTAATTCTATACCACCACAGCATCCTTCTCAACAGTCTCAACAGCCTTCATCTAGCGCCTCTTCTGCAAAACCTAGATTAGTCCCTGAAAAACCAGTGGCAAGAGTTAATTCGACATCAACTCCTGATGTTAAAGCCATTGCACTAGCTGCCGGTGCCCGAATAATTTCCCCATCTGGTGGTGCATCACAACTTAAGGTTGCACAAGTAAGAAATGCTGTGCCTGCCACAAGTAGTTCTTTGGCGAAGTCATCCACTCCACCTGCTTTGCCTTCTGAATCAAAAGTACAATCTTCTACCGGTTCAAGTGCTCCGGTTGTCCCCCCCCAAGCAGCTGTTGCTAGCACATCTTCTGCGCCATGCGCTAGTGTCGCCAAAGCTTCTACAACTCCGTCTACATTGTCTGAACAAAACAAGAATGTTACTACCTCTGTAGTTAATGAAGTTCCAGTGACGCAAGAAGTTAATACATGCCAAGCACAAGAGAAGAGTGTCCAGAATAATGAGAAGTTAGATCAAGATAAAAGCACGAGTATACCAGTTAAAGAAGGTTCGGCTAATTCAACTGAAAGTATAAGAGTTGCAGAAGCAGTGGAAACTAATAATCAACAAATTGCTTCTGGTAGCAATGTGGACAAAGGGAGCCTTGATTCTAATCAAGAGAAGAGCAAAGATTCAGTTAATGGAAGTTCTGAGATCAAACCATGA 1683 0.4498 MTMPEKKPKKVSFTERDAATLTQRYDATTVLTLLQEVAQYSEAKIDWKELVKKTSTGISSAREYQMLWRHLAYHDALSDNLEDGAEPLDDDSDLECELEALPPVGVESAAEAAACVKVMIASHSLSDSTPTSSTIEAPLTINVPVLHSSGTPNESSQSSDLMHGTNIIFPVTVQRQTLPTVSSSDGLESKGTGGGNMASKRKRTAWSEEEDKQLRAAVQRWGEGNWATMVKDDNFPVKRSPTQLAQRWSVLRKKDGSTNSGTILSSTPYTTAEQLATRHSLSLALDMPFKKLSAPGMTNQGRTPLNPPSKNQVQRTTSEALTTAHPNSIPPQHPSQQSQQPSSSASSAKPRLVPEKPVARVNSTSTPDVKAIALAAGARIISPSGGASQLKVAQVRNAVPATSSSLAKSSTPPALPSESKVQSSTGSSAPVVPPQAAVASTSSAPCASVAKASTTPSTLSEQNKNVTTSVVNEVPVTQEVNTCQAQEKSVQNNEKLDQDKSTSIPVKEGSANSTESIRVAEAVETNNQQIASGSNVDKGSLDSNQEKSKDSVNGSSEIKP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1109 560 Gene3D - 196 258 - -
Aev08g1109 560 MobiDBLite consensus disorder prediction 484 560 - -
Aev08g1109 560 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Aev08g1109 560 MobiDBLite consensus disorder prediction 292 364 - -
Aev08g1109 560 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
Aev08g1109 560 MobiDBLite consensus disorder prediction 484 551 - -
Aev08g1109 560 SMART sant 202 254 IPR001005 -
Aev08g1109 560 CDD SANT_TRF 206 253 - -
Aev08g1109 560 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 548 - -
Aev08g1109 560 SUPERFAMILY Homeodomain-like 201 254 IPR009057 -
Aev08g1109 560 MobiDBLite consensus disorder prediction 403 434 - -
Aev08g1109 560 MobiDBLite consensus disorder prediction 179 211 - -
Aev08g1109 560 Pfam Myb-like DNA-binding domain 203 250 IPR001005 -
Aev08g1109 560 MobiDBLite consensus disorder prediction 296 349 - -
Aev08g1109 560 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1109 Aev-Chr8 6761688 6765857 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev08g1109 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1109 - - adu:107460964 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1109 08 6761688 6765857 Aev08g1109 08 6761688 6765857 ECH