Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1104 ATGGTCTACCCAGGTTCAATGCAATTGGCTCGTGATGTTAGGCTCCATAGCAGTAATGGGTTCTGTAGTTTTCATAGTAATCCAATGGGTGTTGGGCGGTTACATTTGGTTACGATAAATCTTTCACCACGTAGTTTGAAGCAGGATTCTTCAGCACTCTATCTCCTCAGTAGAGTACATGCTCCTGTAAAGCACGTGCCTCCCAGATATAAAGTTTTTGTGTGTCGTTCTGCCCTACTACCAGGTGGAGCAAGTGGGACTCCACTTATGAAATCTGCTGCTATTTTTCTGACAAGGTCGCATGAAGCTTTACAAGGAAGCCCTGTTTTGCTTCGATTGATCCCAGCACTTGGTATCATTGCCTTTGCTGTTTGTGGTCTTGAGCCACTTATACGTCTTGGCAGAGTTTTATTTCTCCAAAGGACTGACAGTAGTTGGAAGAAAAGTAGTTCCAGATATATTATGACATCTTATTTTCAGCCTTTGCTATTATGGACTGGGGCAATGCTCATATGCAGGGCACTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAACGGCTTCTGAATTTTGTGAGATCGTTATCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTCATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCCGGTGATGCAAGAAATATGGGCCTGGATTTTGCTGGGAAAGCTATATATACTGCTGTATGGGTTGCTGCAGTGTCATTGTTCATGGAACTACTAGGTTTCTCCACACAGAAGTGGTTAACTGCCGGTGGTTTGGGCACAGTATTGCTCACTCTTGCAGGTCGCGAGATATTTACGAACTTCCTTTCAAGTATAATGATCCATGCAACTCGGCCATTTATTTTGAATGAGTGGATTCAAACAAAGATCGAAGGATATGAGGTTTCTGGTACAGTTGAGCATGTAGGATGGTGGTCACCAACCATTGTGAGAGGTGATGATCGGGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTAAATGTTGTGAGAAACCTGACTCAAAAATCTCATTGGCGCATCAAGAGTTACATTGCTATAAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGAGGAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGCAAAAATTGCACAGAAGGGTTTTTCTGGAGAATGTTAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTCGTGAAAACTTCACATTTTGAAGAGTACCTCTGCGTTAAGGAGGCAATTCTTTTGGACCTTCTCAGAGTTGTCAGTCATCATCGAGCTCGGCTCGCCACTCCCATTCGCACAGTTCAGAAAATATATGGCGAGGCTGACTCAGACAATATACCCTTTGGGGACACCATTTTCTCCCGAACAAGAGCAGCGGCTAATCGCCCATTCCTACTGATAGAACCACCGTACAAAGTTAATGGTGAGGATAAAGTTAAGCCTTCAACACGTTCATCTCGAACAAATGAGGAAAAAGATGCCAAGGTTGATGACACCCTGATGTCCGACTCCAAAGGAGATGAAAATTCAGTGGTTACATCAACCTCCTCACCGGGTGTAAGCTCCAAGGATAAATCCAAGTCAGCTTCTGAAGCACAAACTCAGAATATGAGTTCGGATGGCTCAGTTGAGAAGACGTCCAAAACCTTGCAACCCAAAAAAGAAAGTGCTGTAGAGTCCGGAAAGGGAGCAACAGTTCCTGTATCTAAAAACCCTGCACAAAATGCATTGCCTGAAGTTTCTCCGGCCACTTCCCATGAGTCTGGCAAGGGAGAGACTGCTCCTGCAATTCCATCACAGCCAAAGCAAGACGAAGAGAAACCTTCTGTGCCTTCACCATCAGTTAGGCCTTCCTTGGAAGATAACATTCTTCTTGGTGTTGCCCTAGAAGGCTCAAAACGAACTCTTCCGATAGAGGAAGAAATGACTCCATCGCCGATCCCTACCGAATCGCAAGAATTTGCTGTCCAAAGGAATGGGAGTGGACCTCCTGCCAGCAAGGATAAGAAGGATGGCCAGGCATCTTCATTTCCATCTGCTAAGCAGAATGAATGA 2121 0.4366 MVYPGSMQLARDVRLHSSNGFCSFHSNPMGVGRLHLVTINLSPRSLKQDSSALYLLSRVHAPVKHVPPRYKVFVCRSALLPGGASGTPLMKSAAIFLTRSHEALQGSPVLLRLIPALGIIAFAVCGLEPLIRLGRVLFLQRTDSSWKKSSSRYIMTSYFQPLLLWTGAMLICRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSSFIQQAQKFFMEANDSGDARNMGLDFAGKAIYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQKSHWRIKSYIAISHLDVNKINNIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYGEADSDNIPFGDTIFSRTRAAANRPFLLIEPPYKVNGEDKVKPSTRSSRTNEEKDAKVDDTLMSDSKGDENSVVTSTSSPGVSSKDKSKSASEAQTQNMSSDGSVEKTSKTLQPKKESAVESGKGATVPVSKNPAQNALPEVSPATSHESGKGETAPAIPSQPKQDEEKPSVPSPSVRPSLEDNILLGVALEGSKRTLPIEEEMTPSPIPTESQEFAVQRNGSGPPASKDKKDGQASSFPSAKQNE* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1104 706 MobiDBLite consensus disorder prediction 527 568 - -
Aev08g1104 706 MobiDBLite consensus disorder prediction 495 706 - -
Aev08g1104 706 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Aev08g1104 706 MobiDBLite consensus disorder prediction 589 610 - -
Aev08g1104 706 Gene3D - 298 353 IPR023408 -
Aev08g1104 706 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 698 - -
Aev08g1104 706 Gene3D - 193 296 - -
Aev08g1104 706 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 698 IPR045042 -
Aev08g1104 706 MobiDBLite consensus disorder prediction 667 681 - -
Aev08g1104 706 MobiDBLite consensus disorder prediction 495 526 - -
Aev08g1104 706 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1104 Aev-Chr8 6726293 6730807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1104 1 678 Mechanosensitive Ion Channel Family AT1G58200 54.179 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1104 K22047 - gmx:100796022 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1104 08 6726293 6730807 Aev08g1104 08 6726293 6730807 ECH