Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1102 ATGATGTTGTGGTCATTGCACGACCTTGGACTTCAGTTCAATTCAACAATGGCCTATTCGGGTTCTCATGATGTTAGGCTGTACAGTAATATTGGAAGATGTAGTTGTTGTTATAGCCCCATGCGCAGCGATCGACTATGCTTTGTTACTATCCATCATTTGAAACAATCTTTGAGGCAGGATTCTTCAGCACTCCTTGTTTCCAGAGTACATGCTCCGCTTAGTCCTTTACCTTCTAGATATAATGTCTTCTGGTGCCGATCTGCCATGGCGATACCAGCTGGAGGGAGTGAGACCTCACTCATGAAGTTGGCTACTATTTCTTTGTCAAGGTCATTTGAAACTATATCGGGAAGAAACGTTGCACTTCATTTGATCCCAGCCCTTGGTATCATTGGCTTTGCTGTCTGTGGTCTTGAGCCGCTCCTACGCCTGAGCAGGGTTCTGTTTCTGCAAAGGACAGATAAAAGTTGGAAGAAAAGCAATTCACATCATGTTATGACATCTTATCTTCAACCCTTGCTGATGTGGACGGGGGTAATGCTCATCTGCAGGGATTTAGATCCACTAGTCCTAACATCGACAACCAGTCAAGCCGTGAAGCAACGGCTCCTGAGTTTTGTGAGATCTTTGTCAACAGTCCTTACGTTTGCTTATTGTTCTTCAAGCTTAATTCAAGAAGCACAAAGATTTTGCATGGAAATGAACGACTCCAGTGATGAAAGAAATATGAGAATTGATTTTACCGGTAAAGCTGTATATACTGCAATTTGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACAAGAAGGTGGTTGACTGCTGGTGGTTTGGGCACAGTCTTGCTTTCTCTTGCTGGTCGTGAGATATTCACAAACTTCCTTTCAAGTGTAATGCTTCATACAACTCGGCCATTTGTTGTGAACGAGCGGATTCAAACGAAAATCAAAGGAGATGAGGTTTCTGGTAAAGTTGAGCATGTAGGTTGGTGGTCTCCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAACCACAGATTGAGTGTAAATGTTGTGAGAAATCTTAGCAAGAAATCTCATTGGCGTATCAAAACTCACCTTGCTATCAGTCACTTGGATGTTAACAAAATCAACAGTATTCTAGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGAAAAAATTGCACAGAAGGGTTTTTCTTGAGGATATCAATCCAGAAAATCAGGCTCTTATGATATTAGTATCTTGCTTCGTTAAAACTTCACATTCTGAAGAGTACCTCCGTGTTAAGGAGGCAGTTCTCTTGGATCTTCTCAGAGTTATCAGTCATCATGGAGCACGGCTAGCAACACCCATCCGCACAATTCAGAAGTCATACAGTGATTTTGATTTAGAACATGATCCATTTGATGACCCGATTTTCGCTCGTTCCGGAGCAACGGCCAGCCAGCCATTCCCACTGACAGAATCACCTGATAACTTCAAGCCTTCAATTCATTCCACCATCACAAACGAGGAGAAAGTTCCTGAGTTTGATGAAACCTTAAGATCTGACTTCAAAGTAGAGTTTGACAATCTTGCAGGGCCATTGACCCCCACATCTGGTGTAAAGTCCAAGGAGAAATCTAAGTCAACTTCTGAACCCAAAATCCAGGGTATGATTTGTGATGATAATCCTGTCCAGAAGACCTCGAAATCTCTGCAGCCGAAGGAAAGAACTGGGGGAGAAGGAAAGGGTGCAGCACCCAAACTTTTGTCAACTTACAATAAGTCTGACAGATCTGTTACTTCTTCATCGTCAAAGAAAGGTGGAGACAAAGAGAAATCTGCCATCTCCTCGTCATCCACAATCCCTTCCTTGAAAGAGAATATCGTTCTTGATGCTGCCCTACAGGGCTCAAAACGAACCCTTGCGATTGATGACGAAACAAGTCCATCTATCTCTGCAGAATCCCAAGAATTTGCTGTCCAACAGAATGGGCGTGAACCTTCTGTTAGCAAGGAAAATAGGGATGGTAAGAAGAGTAGATGA 2070 0.4285 MMLWSLHDLGLQFNSTMAYSGSHDVRLYSNIGRCSCCYSPMRSDRLCFVTIHHLKQSLRQDSSALLVSRVHAPLSPLPSRYNVFWCRSAMAIPAGGSETSLMKLATISLSRSFETISGRNVALHLIPALGIIGFAVCGLEPLLRLSRVLFLQRTDKSWKKSNSHHVMTSYLQPLLMWTGVMLICRDLDPLVLTSTTSQAVKQRLLSFVRSLSTVLTFAYCSSSLIQEAQRFCMEMNDSSDERNMRIDFTGKAVYTAIWVAAVSLFMELLGFSTRRWLTAGGLGTVLLSLAGREIFTNFLSSVMLHTTRPFVVNERIQTKIKGDEVSGKVEHVGWWSPTIVRGSDCEAVHIPNHRLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSILADMRKVLAKNPQVEQKKLHRRVFLEDINPENQALMILVSCFVKTSHSEEYLRVKEAVLLDLLRVISHHGARLATPIRTIQKSYSDFDLEHDPFDDPIFARSGATASQPFPLTESPDNFKPSIHSTITNEEKVPEFDETLRSDFKVEFDNLAGPLTPTSGVKSKEKSKSTSEPKIQGMICDDNPVQKTSKSLQPKERTGGEGKGAAPKLLSTYNKSDRSVTSSSSKKGGDKEKSAISSSSTIPSLKENIVLDAALQGSKRTLAIDDETSPSISAESQEFAVQQNGREPSVSKENRDGKKSR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1102 689 MobiDBLite consensus disorder prediction 560 583 - -
Aev08g1102 689 MobiDBLite consensus disorder prediction 493 523 - -
Aev08g1102 689 MobiDBLite consensus disorder prediction 650 689 - -
Aev08g1102 689 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 21 618 - -
Aev08g1102 689 Gene3D - 203 308 - -
Aev08g1102 689 SUPERFAMILY Sm-like ribonucleoproteins 294 364 IPR010920 -
Aev08g1102 689 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 21 618 IPR045042 -
Aev08g1102 689 MobiDBLite consensus disorder prediction 542 636 - -
Aev08g1102 689 MobiDBLite consensus disorder prediction 494 517 - -
Aev08g1102 689 MobiDBLite consensus disorder prediction 650 676 - -
Aev08g1102 689 Pfam Mechanosensitive ion channel 251 460 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1102 Aev-Chr8 6717383 6721631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1102 16 669 Mechanosensitive Ion Channel Family AT1G58200 49.483 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1102 K22047 - gmx:100797302 862.448