Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1098 ATGGCTGCTCTTTCCATTGCTTCTTCTTCTCTCACATTCTTCTCTTTCACTATAATCACTCTCCTCTTACTTCCCCATTGCAACAACACCACTACTGTTGCATACACAGCAGCAGACCAACCCAACCACACCAGAGAAACTCCACCTCCACCTCCGCCGCCTCCGCTGCCGCCGCCACCTCCTCCTGAAAAACCATCCTCCGCCTTCAAGCCAGGAATGGCGGTAGTAGTGGGCGTCCTAACCACAATGTTCTCCCTCACCTTCCTCCTCCTACTCTACATCAAGCACTGCAACGCTACCACCGCCGACTCCACCGGCACATCCAGCTACCAAACGTCACGCGCCGCCGCCGCCGCAGCACCCTTCGCCGGGAGAAAAAACTCCGGCATAGACCGTTCGATTGTGGAATCATTACCAATCTTCAGATTCGGATCCCTCAGGGGACACAAAGACGGCCTCGACTGCGCCGTGTGCCTCAACAAGTTCGAATCCTCCGAGGTTCTCCGGCTGCTGCCGAAGTGCAAGCACGCTTTCCACGTGGAGTGCGTTGACACGTGGCTCGACGCGCACTCCACGTGCCCACTCTGCCGCCACCGCGTCGATCCGGAGGACATTCTTCTCGTGGAAGACACCAAGCTGGTCGTACCGCTACACAACAACAGCGAACAGAACGAGTCGTGCTCGGAGAGGAACTCGTTCGTGTTGGAGACTCGTCGAGTTTCGGGGAGGCACTCTTCTGTTGGGGAAAAGGAAGGAGGGTTCTTGGAGATTATTCTGGAGGACGAGACGGAACGACGAGACGGCGCGTCGTTTAGGAGGTCATTGGACAGTGCCACGTGTACATCATCATCATCGACGTCGAGATCGAAGAAGAAGGAAGCTGTGAAGGGCGTAACGGGGTGGTTAGTGCGTCCCAGAAAAGACGGGATGCTGTTGGTGAGTCAGCAGGAGAGAGAGAGAGAGAGAGGGGGGGGATTAGTGGGGCCCAGTAGTAGGATGAGCGCCGAACGGAGGGTGGAGCACAGGATAATTGTCTCCCCTTCGCCGAGGCAATGTGGGGGGGCCCACAGGGACCAGAGGTGGAGCGATGTTCAGCCGTCGGATCTGCTGTACCTGACGTCGGAGATGATAATCAGCGGCGGTGGAAAAGAGGAGGACAGATGGGTAATAAACACAAGGAGCGTGTCGGAGATCACGGGATTGAGCAGGTTTGTGAGGAACAAGGGAGGAAAACAAGGCCGAGACCGAGAAGAAGGGGTGGTTTCGAGGTGGTTGGCTTGGATTTCAAGGTCACAGACACAGCCAGCTGTACGGTAG 1317 0.5649 MAALSIASSSLTFFSFTIITLLLLPHCNNTTTVAYTAADQPNHTRETPPPPPPPPLPPPPPPEKPSSAFKPGMAVVVGVLTTMFSLTFLLLLYIKHCNATTADSTGTSSYQTSRAAAAAAPFAGRKNSGIDRSIVESLPIFRFGSLRGHKDGLDCAVCLNKFESSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRHRVDPEDILLVEDTKLVVPLHNNSEQNESCSERNSFVLETRRVSGRHSSVGEKEGGFLEIILEDETERRDGASFRRSLDSATCTSSSSTSRSKKKEAVKGVTGWLVRPRKDGMLLVSQQERERERGGGLVGPSSRMSAERRVEHRIIVSPSPRQCGGAHRDQRWSDVQPSDLLYLTSEMIISGGGKEEDRWVINTRSVSEITGLSRFVRNKGGKQGRDREEGVVSRWLAWISRSQTQPAVR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1098 438 MobiDBLite consensus disorder prediction 274 288 - -
Aev08g1098 438 SUPERFAMILY Formin homology 2 domain (FH2 domain) 50 61 - -
Aev08g1098 438 SMART ring_2 155 196 IPR001841 -
Aev08g1098 438 CDD RING-H2_EL5_like 154 197 - -
Aev08g1098 438 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 204 IPR013083 -
Aev08g1098 438 SUPERFAMILY RING/U-box 136 202 - -
Aev08g1098 438 PANTHER RING-H2 FINGER PROTEIN ATL43 42 434 - -
Aev08g1098 438 Pfam Ring finger domain 154 197 IPR001841 -
Aev08g1098 438 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 42 434 - -
Aev08g1098 438 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
Aev08g1098 438 MobiDBLite consensus disorder prediction 44 67 - -
Aev08g1098 438 MobiDBLite consensus disorder prediction 38 67 - -
Aev08g1098 438 MobiDBLite consensus disorder prediction 268 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1098 Aev-Chr8 6688542 6689858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1098 66 437 C3H Transcription Factor Family AT5G05810 47.927 6.59e-92 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1098 K19041 - twl:119999828 326.25