Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1096 ATGAAAGGAGAATATGCAGAACAGCACCACGCAAAGAGTGAATCACAGAGCATGTTCTCAAAGCTTCAGCAGCAGCAGCAGCAACAACAGCATCATCCATTTCCTCACCACCCGTTTCAGCTCTCACGGCCGGATCAATGCCTACCGGAGGAAGATAAACGGACCATCGGTGGCGCCGCCGCCTCCAACGCCGCTCAGAAGCCCAACTCCTCTGGCGGCGACGGGGCAACAATAGAGGTTGTGAGGCGGCCAAGGGGCCGCCCACCCGGGTCAAAAAACAAGCCCAAACCGCCAGTAATAATAACACGCGAGCCCGAGCCCGTTATGAGCCCGTACATTCTGGAAGTCTCGGGAGGAAACGACGTCGTAGAGACACTCGCAAGGTTTAGTCGCCGCAAGAACATGGGACTATGCGTCCTCACGGGTTCAGGAACCGTCGCTAACGTCTCGCTCCGACAACCCTCCGCAACTCCCGGAGCGACCGTTACTTTTCACGGCCGCTTCGAGATCCTCTCCGTCTCCGCTACGTTCCTCCCTCAGCCTTCGCCGGCGGTTCCCAGCGGATTCGCCATCTCGCTCGCCGGGCCGCAGGGTCAGATCGTTGGAGGCCACGTCGTCGGCGGGTTGATGGCCGCTGGAACCGTTTTCGTGATCGCTGCTTCGTTTAATAACCCATCGTTTCACAGGCTGCCTCCGCCGGAGGAGGAGGCGAGGAACTCTGTCTCCGGCGGGGATGGACAGTCACCGCCAGTTTCCGGCGGTGGCGTGGAGAGCGGTCACGCACAGGCGGCGGAGTCGTGTGGAATGTCTATGTTCAACGTTCACTTGCCGTCCGATGTGATTTGGGCTCCGACGGCAAGACCGCCGCAGCCACCACCTCCTTACTGA 888 0.5991 MKGEYAEQHHAKSESQSMFSKLQQQQQQQQHHPFPHHPFQLSRPDQCLPEEDKRTIGGAAASNAAQKPNSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPVMSPYILEVSGGNDVVETLARFSRRKNMGLCVLTGSGTVANVSLRQPSATPGATVTFHGRFEILSVSATFLPQPSPAVPSGFAISLAGPQGQIVGGHVVGGLMAAGTVFVIAASFNNPSFHRLPPPEEEARNSVSGGDGQSPPVSGGGVESGHAQAAESCGMSMFNVHLPSDVIWAPTARPPQPPPPY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1096 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 294 IPR014476 GO:0003680
Aev08g1096 295 Gene3D - 110 243 - -
Aev08g1096 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 237 - -
Aev08g1096 295 PIRSF ESCAROLA 4 284 IPR014476 GO:0003680
Aev08g1096 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 224 IPR005175 -
Aev08g1096 295 ProSiteProfiles PPC domain profile profile. 106 244 IPR005175 -
Aev08g1096 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 19 294 - -
Aev08g1096 295 MobiDBLite consensus disorder prediction 12 35 - -
Aev08g1096 295 CDD DUF296 111 222 IPR005175 -
Aev08g1096 295 MobiDBLite consensus disorder prediction 1 102 - -
Aev08g1096 295 MobiDBLite consensus disorder prediction 227 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1096 Aev-Chr8 6675266 6676153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1096 74 295 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 65.517 2.11e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1096 - - adu:107460948 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1096 08 6675266 6676153 Aev08g1096 08 6675266 6676153 ECH