Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1082 ATGGAATTTGAAGAGCACGAGGACCAAGAGGAAGAGGAAATGGGGATCCCGGAGCCGCCGCCTCCGCCGCCGGGTTACGACTCCTTCGGAAACTCAGCGGTGAGGTCTAAAACTGCCACCGAAACCGTCGCAGGAACCGAGGGCGGCGCAGCCGCCACCACACCTGGTCGGAAAAGTGGGTCCACCGGGACGGTTCGCTACAGAGAATGTCAAAAGAACCACGCCGTGAGCATCGGCGGCCACGCCGTCGACGGCTGCTGCGAGTTTCTGGCAGCTGGAGATGAAGGCACGCTGGAGGCCGTGATTTGCGCCGCCTGTAACTGTCACCGGAATTTCCACCGCAAAGAGATCGAAGGCGAGATGAGCTCCTTTCACCACCAGCCGCGGCCGCAGCCTCAGGCATCGCTGCACCACCACCAATTCTCCCCTTACTACCACCGGGCGCCGCTGCCTCCTCCGGCAGGGTACCTCCACCACCACCACCACCTGGCGAGTCCGCCGGTGTCCCAGCAGCGCCCCTTGGCTCTGCCACCAGCAGCGTCGGGCGGAGGGGGGTTTTACAGGGAAGAGGAAGACATGTCGAACCCGAGCAGCAGCGGAGGCGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGAGCGGATCGAAGAAGCGGTTCAGGACGAAGTTCACGCAGGAGCAGAAGGATAAGATGCTGGCATTTGCGGAGCGGTTAGGGTGGAGACTCCAGAAGCATGATGAATCTGCGGTTGAGCAGTTCTGTGCTGAGACCGGTGTGAAGAGGCAGGTCCTCAAGGTTTGGATGCACAACAACAAGCACACAATTGGTAAGAAACCCTAG 837 0.6165 MEFEEHEDQEEEEMGIPEPPPPPPGYDSFGNSAVRSKTATETVAGTEGGAAATTPGRKSGSTGTVRYRECQKNHAVSIGGHAVDGCCEFLAAGDEGTLEAVICAACNCHRNFHRKEIEGEMSSFHHQPRPQPQASLHHHQFSPYYHRAPLPPPAGYLHHHHHLASPPVSQQRPLALPPAASGGGGFYREEEDMSNPSSSGGGGGGGGGGGGSGSKKRFRTKFTQEQKDKMLAFAERLGWRLQKHDESAVEQFCAETGVKRQVLKVWMHNNKHTIGKKP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1082 278 MobiDBLite consensus disorder prediction 152 217 - -
Aev08g1082 278 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 215 271 IPR006455 -
Aev08g1082 278 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 277 - -
Aev08g1082 278 MobiDBLite consensus disorder prediction 1 15 - -
Aev08g1082 278 MobiDBLite consensus disorder prediction 1 63 - -
Aev08g1082 278 Gene3D - 202 275 - -
Aev08g1082 278 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 67 116 IPR006456 -
Aev08g1082 278 Pfam ZF-HD protein dimerisation region 65 117 IPR006456 -
Aev08g1082 278 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 277 - -
Aev08g1082 278 SUPERFAMILY Homeodomain-like 202 276 IPR009057 -
Aev08g1082 278 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 66 117 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1082 Aev-Chr8 6565854 6566690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1082 1 274 ZF-HD Transcription Factor Family AT4G24660 48.727 3.45e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev08g1082 ZF-HD_dimer 4.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1082 - - gmx:100820567 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1082 08 6565854 6566690 Aev08g1082 08 6565854 6566690 ECH