Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1068 ATGGCACTAGAAGCTGTGGTTTTCCCACAAGATCCATTCACTTATGGGTGCAAGGATTACTTGTACTCCTTTGTCGGAGGAGCAGGTAGCAGCGGCGCGTGGAGCAGCCACCACCACGACTATGGTAGTTACGAAGCAGGGGAGGAAGAGAAAGTGCTGCTTGGAATCATCAACAACAACATAGAACAGAGCCTTCATGCAACCACTTGGGATCACTCTTCTAATTCCACATCGGTGCTTCAAAACGTTAAGGAACAGCAATGGGATTCCCACACCTCCTCCCCTGATGAGACCTGCACCGTTGACCAGTCCTTCACTGCGACTTTCCCTCCTCTCACCGCATCTTCCTCCGTGGAGGCAGCCACGACGGGGGCCGCCACCACCGCTGGCCGCCGCAAACGACGCCGCACCAAGAGCGCCAAGAACAAGGAGGAGATCGAGAACCAGAGGATGACCCACATTGCAGTGGAGCGCAATCGCAGAAAACAGATGAACGAGTACCTTGCCGTCCTCCGATCCTTGATGCCTCCTTCTTATGTTCAAAGGGGTGATCAAGCGTCTATTATTGGGGGCGCTATAAACTTTGTGAAGGAGCTAGAGCAACTATTGCAGTCCATGGAGGGTCAAAAGAAACCAAATGAACAGGGACATGAGAATGGGAATGGGAGTCGAAGTGTTGGTGGTTTAAATAACGGTTCGCCCTTTGCAGAGTTCTTCACGTTTCCTCAGTACACGACGCGTGCAGCAACAGCAACTCAGGGGGGGATGTTGTCGTCGACGATGGGACAGAACAGCATTCAGCAGCATCAGGATCAGCAGAAACAGTGGGCTGTGGCGGACATAGAAGTGACCATGGTGGACAGCCATGCCAACATGAAGATACTGTCAAAGAAACGACCGGGGCAGCTCATGAAGATGGTTGTTGGCCTCCAATCTCTCAGCCTCAACATTCTTCATCTTAATGTTACCACTCACCACGATATGGTCCTCTACTCTGTTAGTGTCAAGGTAGAGGAAGGGTGCCAGCTGAACACAGTGGATGAAATTGCTGCTGCTGTGAATCAACTATTACGCACAGTCCAAGAAGAAGCGGCTTTCAGCTGA 1104 0.5154 MALEAVVFPQDPFTYGCKDYLYSFVGGAGSSGAWSSHHHDYGSYEAGEEEKVLLGIINNNIEQSLHATTWDHSSNSTSVLQNVKEQQWDSHTSSPDETCTVDQSFTATFPPLTASSSVEAATTGAATTAGRRKRRRTKSAKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKPNEQGHENGNGSRSVGGLNNGSPFAEFFTFPQYTTRAATATQGGMLSSTMGQNSIQQHQDQQKQWAVADIEVTMVDSHANMKILSKKRPGQLMKMVVGLQSLSLNILHLNVTTHHDMVLYSVSVKVEEGCQLNTVDEIAAAVNQLLRTVQEEAAFS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1068 367 PANTHER MAX DIMERIZATION, MAD 1 365 - -
Aev08g1068 367 Gene3D - 132 215 IPR036638 GO:0046983
Aev08g1068 367 MobiDBLite consensus disorder prediction 116 144 - -
Aev08g1068 367 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 199 IPR011598 GO:0046983
Aev08g1068 367 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 365 - -
Aev08g1068 367 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 213 IPR036638 GO:0046983
Aev08g1068 367 SMART finulus 154 205 IPR011598 GO:0046983
Aev08g1068 367 CDD bHLH_AtFAMA_like 151 216 - -
Aev08g1068 367 MobiDBLite consensus disorder prediction 209 229 - -
Aev08g1068 367 Pfam Helix-loop-helix DNA-binding domain 149 200 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1068 Aev-Chr8 6482165 6483727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1068 1 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 45.428 4.99e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g1068 HLH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1068 - - gmx:100805420 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1068 08 6482165 6483727 Aev08g1068 08 6482165 6483727 ECH