Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1066 ATGGCGTTACTACGTCTTCTTTGCTTTCCTTCTTCTGTAACAACTCACCTCTTCACACAACAAAACCAAAAACTTCTAACCTCTTTCTCATCCCATAGCACTCACAACCACTCCTCTTCATTTCACCTTCTACGATGGTCCCTTCCTCAAACCCCAACTCTGTTCACAACCAAACAAAGCCCTAATTTCACTCTCAGATTCGCCGAACAGGCAGAGGCAGTGACTATCTCCACCGAGGAACAAGGGGAAACCGAGGAGTTTTCTCCGACGAGGTTGCTTGCTCAGAACGTGCCTTGGACCAGTACACCTGAAGACATCCGGTCCTTGTTCGAGAGGCATGGAAGAGTCCTCGAAGTTGAGTTGTCTATGTTCAACAAGACCAGGAACAGGGGTTTGGCCTTTGTGGAAATGGGTTCACCAGAAGAGGCTCGTGCGGCTCTGGAAAATCTCGAATCGTATGACTTTGATGGTCGGATAATAAAACTCAGTTATGCTCGGCCGAAAAAGAAGAAGATTCCGCCTCCCGTGAAGCAACCAAAGCCGGTGACATTTAACTTGTTTGTTGCAAACTTGTCCTATGAAGCAAGGTCTAAAGATCTCAAGGAGTTTTTCGATGATGGAAGTGGTAGTTTGGTTTCTGCGGCAGTTATATTTCATGATAACCCTAGAAAGTCATCTGGTTATGGTTTCGTGGGCTTCAAAACCAAGAAACAAGCTGATACAGCTCTTGCCGAGTTCCAAGGAAAGATTTTTATGGGAAGACCTATCAGGGTGGCTCGTGGTAGGCAATTTGTTAAGCAACGAGTTGAAGAGAGTGAAAAGTCTGAAGATACATCTCCTGAGTTGAGTGTGAATGGCGCAGAAGCAGACAAAGCTGAAGATACGTCTCCTGAGTTGAGCGTGAATGGCGCAGAAGCAGACAAAGCTGAAGATACGTCTCCTGAGTTGAGCGTGAATGGCACAGAAGCCGACAAAGCTGATTGA 984 0.4634 MALLRLLCFPSSVTTHLFTQQNQKLLTSFSSHSTHNHSSSFHLLRWSLPQTPTLFTTKQSPNFTLRFAEQAEAVTISTEEQGETEEFSPTRLLAQNVPWTSTPEDIRSLFERHGRVLEVELSMFNKTRNRGLAFVEMGSPEEARAALENLESYDFDGRIIKLSYARPKKKKIPPPVKQPKPVTFNLFVANLSYEARSKDLKEFFDDGSGSLVSAAVIFHDNPRKSSGYGFVGFKTKKQADTALAEFQGKIFMGRPIRVARGRQFVKQRVEESEKSEDTSPELSVNGAEADKAEDTSPELSVNGAEADKAEDTSPELSVNGTEADKAD* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1066 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 90 167 IPR000504 GO:0003723
Aev08g1066 327 CDD RRM_SF 96 163 - -
Aev08g1066 327 SUPERFAMILY RNA-binding domain, RBD 89 259 IPR035979 GO:0003676
Aev08g1066 327 Gene3D - 172 293 IPR012677 -
Aev08g1066 327 CDD RRM_SF 186 258 - -
Aev08g1066 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 186 257 IPR000504 GO:0003723
Aev08g1066 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 160 IPR000504 GO:0003723
Aev08g1066 327 PANTHER OS08G0483200 PROTEIN 1 292 - -
Aev08g1066 327 SMART rrm1_1 185 259 IPR000504 GO:0003723
Aev08g1066 327 SMART rrm1_1 91 163 IPR000504 GO:0003723
Aev08g1066 327 PANTHER RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN 1 292 - -
Aev08g1066 327 Gene3D - 58 171 IPR012677 -
Aev08g1066 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 184 263 IPR000504 GO:0003723
Aev08g1066 327 MobiDBLite consensus disorder prediction 268 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1066 Aev-Chr8 6471301 6472823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1066 90 258 Eukaryotic Initiation Factors Gene Family AT3G16380 31.638 3.97e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1066 - - gmx:100790439 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1066 08 6471301 6472823 Aev08g1066 08 6471301 6472823 ECH