Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1056 ATGGCAAGCACAAGCGTTACCCGGGAAAATATTGGCAAGCCTATAAGATGCAAAGCTGCAATATGCAGAAAAGCAGGGGAAGCTCTTGTTATAGAGGAAGTTGAGGTAGACCCGCCAAAAGCTTGGGAAATCCGGATCAAGATTCTATGCACTTCTCTGTGTCACTCTGATGTAACCATTTGGAAAATGGATCAAGTTCCCGCATCCTTCTTTCCAAGAATTTTTGGCCACGAAGCTGTGGGAGTTGTGGAGAGCGTGGGGGAGCATGTGGAAGAATTTAAAGAGGGGGACAGAGTGGTGCCAGTGTTCCAAGCAAACTGTGGGGAATGCGCTGACTGCAAGAGCCCAAAAAGCAACACATGCTCCAAATTCGGGAACAGTAGCTTGATCCTTGACATGCCCAGAGATGGCACAAGCAGGTTCAGGGACATGATGGGAGAGCCCGTGCACCATTTCTTCGCTGTTTCAAGCTTCTCTCAGTACACGGTTGTGGATGTGACCCATGTGGCCAAAATTAGCCATCACATTCCTTTTGATAAGGCTTGCTTGCTTAGCTGTGGAGTTTCAACAGGAATTGGAGCAGCGTGGAAGGTAGCTGACGTAGAGAAAGGATCCACAGTGGCTATTTTTGGGCTTGGAGCTGTGGGCCTAGCCGTTGCAGTTGGAGCAAAGCAACGAGGAGCATCCAAGATCATAGGCGTCGACCTTAATAATGAAAAATTTGAAATAGGAAAAAGATTTGGAGTGACTGATTTTGTGAATCCCTCCACTTGTGAAGATAAGTCAGTGAGCGAGGTGATTAAGGAAATGACAAATGGAGGTGCTGATTACTGCTTTGAATGCATAGGCTTGGCATCATTAATGGCGGAGGCTTTTAACAGTAGCCGAGAAGGTTGGGGGAAAACGGTGATATTAGGGGTGGAAATGCATGGATCGGCATTGAGTTTGAATCCTTATCAAATAATGAGAGGCAGAACGATCATAGGCTCACTATTTGGGGGTATCAAACCCAAATCTGACATTCCCCTCCTTGCCAACAACGTTTTATCCACCCTTTTGAGTTGTGACCCAACGCAACGCAATCTTTCTCCTTTTTGTTTTCTTGTCCGCCTCCCTGTTCTTGTGCTGTTGCTTGTTTCTCGGTTTCCCCTTTCATCAATGGCGGCAGCTCCTGACAACCCCATCTCTCTAGCTGAGCAATATTATGTGAAGGAGAAACAGGATAACACTGATGTAGATACGAAACCTGAGGAGGTCAAAGAAGCTGAAAACCCCAAGGAGGTCAAAGAAACTGAAAACCCAAAGGAGGCTGCTTCTGAGGAGGTCAAAGAGACTGAAACCCCCAAGGAGGCTGCTTCTGAGGAAACTGCAGCTGGAACAACTGTGGAAGAAAGCCCTGCAGTTGATGAGGAAAGCAGTGAAGTCGCCCCTCCTGCTGAACAGACTACTGATCCGTCATCCAATGCTTCCGAAGCGAGCAATGATGCAGTAACAGAGCAAATCGGTGGGAATACTGAAGAAGAAAATGTTGGTGCTCAAGATGAAGTAGAGGAAACCCCAGAGATTAAGCTTGAGACTGCTCCAGCAGATTTCCGTTTTCCAACTACAAATCAAACAAGGCATTGCTTTACCCGATACGTTGAGTATCACCGATGTGTAGCTGCAAAGGGGGAAGGTGCCCCAGAATGTGATAAGTTTGCAAAATATTATCGATCTCTTTGCCCTGGTGAATGGATTGACCGATGGAATGAGCAGAGGGAGAACGGAACATTCCCAGGGCCGCTGTAA 1788 0.4704 MASTSVTRENIGKPIRCKAAICRKAGEALVIEEVEVDPPKAWEIRIKILCTSLCHSDVTIWKMDQVPASFFPRIFGHEAVGVVESVGEHVEEFKEGDRVVPVFQANCGECADCKSPKSNTCSKFGNSSLILDMPRDGTSRFRDMMGEPVHHFFAVSSFSQYTVVDVTHVAKISHHIPFDKACLLSCGVSTGIGAAWKVADVEKGSTVAIFGLGAVGLAVAVGAKQRGASKIIGVDLNNEKFEIGKRFGVTDFVNPSTCEDKSVSEVIKEMTNGGADYCFECIGLASLMAEAFNSSREGWGKTVILGVEMHGSALSLNPYQIMRGRTIIGSLFGGIKPKSDIPLLANNVLSTLLSCDPTQRNLSPFCFLVRLPVLVLLLVSRFPLSSMAAAPDNPISLAEQYYVKEKQDNTDVDTKPEEVKEAENPKEVKETENPKEAASEEVKETETPKEAASEETAAGTTVEESPAVDEESSEVAPPAEQTTDPSSNASEASNDAVTEQIGGNTEEENVGAQDEVEETPEIKLETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGEGAPECDKFAKYYRSLCPGEWIDRWNEQRENGTFPGPL* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1056 595 SUPERFAMILY Cytochrome c oxidase subunit h 521 594 IPR036549 GO:0005739|GO:0045277
Aev08g1056 595 Pfam Cytochrome oxidase c subunit VIb 532 591 IPR003213 GO:0005739|GO:0045277
Aev08g1056 595 Pfam Alcohol dehydrogenase GroES-like domain 43 171 IPR013154 -
Aev08g1056 595 SMART PKS_ER_names_mod 26 304 IPR020843 GO:0016491
Aev08g1056 595 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 76 90 IPR002328 GO:0008270|GO:0016491
Aev08g1056 595 Gene3D Cytochrome c oxidase, subunit VIb 518 595 IPR036549 GO:0005739|GO:0045277
Aev08g1056 595 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 8 356 - -
Aev08g1056 595 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 347 IPR036291 -
Aev08g1056 595 PANTHER ALCOHOL DEHYDROGENASE 8 356 - -
Aev08g1056 595 MobiDBLite consensus disorder prediction 407 451 - -
Aev08g1056 595 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 539 582 - -
Aev08g1056 595 SUPERFAMILY GroES-like 11 197 IPR011032 -
Aev08g1056 595 MobiDBLite consensus disorder prediction 476 507 - -
Aev08g1056 595 Pfam Zinc-binding dehydrogenase 214 337 IPR013149 -
Aev08g1056 595 CDD Cyt_c_Oxidase_VIb 520 594 IPR003213 GO:0005739|GO:0045277
Aev08g1056 595 Gene3D - 20 357 - -
Aev08g1056 595 MobiDBLite consensus disorder prediction 407 524 - -
Aev08g1056 595 Gene3D - 191 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1056 Aev-Chr8 6410398 6416903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1056 43 186 Monolignol Biosynthesis Gene Families AT4G39330 31.034 4.95e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1056 K00121 - mnt:21395940 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1056 08 6410398 6416903 Aev08g1056 08 6410398 6416903 ECH