Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1043 ATGGCTAAATTGTGCTGTTTTAAGGCTTCTTACTCTCAGCTTGTAGCATCACGTTCCTCATCCAGCACCGGTAAGGGGAAAAACCATGAAGGTTCAATAAAGTATGGTTTCAGCCTAGTGAAAGGGAAAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATAAAGGACAATGAATTGGGTTTGTTTGCTATATATGACGGCCACCTCGGAGACCGTGTTCCGGCCTACTTACAGAAACATTTGTTTACCAACATTTTAAGGGAGGAAGAGTTTTGGGAGGACCCTACTCTATCTATCTCAAAAGCATATGAGAGCACAGATCAGGCAATTCTATCACACAGTGCTGATTTGGGGCGTGGTGGATCGACGGCGGTAACTGCAATATTGATAAATGGACGCAGGTTATGGATAGCTAATGTTGGAGATTCACGAGCTGTTCTTTCTAAAAAAGGCCAAGAGGCATTACAAATGACAATAGATCATGAGCCTAACACAGAAAGAGGCAGCATTGAGAATAGAGGTGGTTTTGTCTCCAACTTGCCAGGTGATGTGCCTAGAGTAAATGGTCAACTGGCAGTTTCTAGAGCATTTGGAGACAAGAGCCTTAAATCACATTTGAGATCAGACCCTGATGTACAGAGTGCTGACATAGATGCTGATACCGATATCCTAATCCTTGCAAGTGATGGACTCTGGAAGGTAATGTCAAATCAAGAGGCAGTGGATATTGCTAGAAAGACGAGAGATCCACAGAACTAA 774 0.4302 MAKLCCFKASYSQLVASRSSSSTGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFVQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQAILSHSADLGRGGSTAVTAILINGRRLWIANVGDSRAVLSKKGQEALQMTIDHEPNTERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQSADIDADTDILILASDGLWKVMSNQEAVDIARKTRDPQN* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1043 257 Pfam Protein phosphatase 2C 43 254 IPR001932 -
Aev08g1043 257 Gene3D - 29 257 IPR036457 -
Aev08g1043 257 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 2 256 - -
Aev08g1043 257 CDD PP2Cc 33 254 IPR001932 -
Aev08g1043 257 PANTHER PROTEIN PHOSPHATASE 2C 2 256 IPR015655 GO:0004722|GO:0006470
Aev08g1043 257 SUPERFAMILY PP2C-like 32 255 IPR036457 -
Aev08g1043 257 SMART PP2C_4 30 253 IPR001932 -
Aev08g1043 257 ProSiteProfiles PPM-type phosphatase domain profile. 34 257 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1043 Aev-Chr8 6317896 6319577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1043 1 248 PP2C-type Phosphatase Gene Family AT1G34750 76.210 7.36e-141 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1043 K17506 - gmx:100797292 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1043 08 6317896 6319577 Aev08g1043 08 6317896 6319577 ECH