Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1041 ATGCCCACCCCATCTGATAGTGTTCAACCTCAATCTACAACAAACAGAGTTGATCCTTTTATTTATGACACCACAGAGTCTGAGCATTTAGAAACTGTCATCTCACCTCCATCACAACTAAATCATGCCACTGATATATCCACACCTATTGCATCACATCCATCAACCAATTCTCTTACCATACCTACATCTGGTATCCCAGGTTCACATGATACTGAACCTTCTTATCCTATCATTCCAAGGAGATCTACTCGAGTTTCACATAAACCTTCATACCTTAGGGACTATCATTGCATGTTGGCTCAATCTGCCAACAACCTTTCCTCAACAACTTCCAGGTCCCCATGCTGTGATGAGAATGGCCTTAAGAAGGGACCATGGACTCCTGAAGAAGATCAGAAGCTTGTAGACCACATTCAAAAACATGGCCATGGAAGTTGGAGAGCTCTCCCCAAACTAGCCGGACTTAACAGATGTGGAAAGAGCTGTAGGCTAAGGTGGACCAACTATTTAAGGCCTGACATAAAGAGGGGAAAGTTCTCTCAAGAAGAGGAGCAAACTATTCTGCATCTCCATTCCATTCTTGGAAACAAATGGTCAGCAATCGCAACCCATCTTCCAGGAAGGACAGATAACGAGATAAAGAACTTCTGGAACACTCATTTGAAGAAGAAGTTGATTCAGATGGGATTTGATCCAATGACTCACCAGCCAAGAACAGACCTGGTTTCCACCTTGCCTTACCTGCTAGCCTTGGCCAACATGACAGACCTCATGGATCATCATCACTACTCACTCATGGATAATAATGAACATGCTCTGAGGTTACACCTCGAAGCAGCTCACCTTTCCAAGCTCCAATACCTTCAATACTTACTCCATTCCTCCTCCTCCTCCTCCTCCTCAAACTCCTTAACTACCAACAACAACAATAATAACTCCTTTGACCAAAACGCCACCATCACAGATAATAATATCATTATGGAGCCTAGTTTCATCTTGTTGAACTCATCATCAATCTCTGATAACAACAATAATAATAATGTGAAAGAGAGCCCTGTTATGGAGTGCCCACAACAACTTTTGGATAATATAAATTCAGCCTCATTATTATTTTGTTCTTCTCCTACTCATGAAATTGGGAGTTCCCATTGCCAACCACTCCACCACCACCAAAACGTGATGCTATCTCATCACTTTTTAGACCCACAACAAGTCCCTTTCAGCACTTCCCAATCATGTTTGAATAATAATAGCAGTACTAGTGAGCTGCTGCAGGGTCAAGGCAATAACTTTGCTTCCATAAGTCCACAAGCAGCAGGAGGGGATCACACCGTTAATATTGATGGATCTTCCTTGTGGAATAATAATAATATATTGAGTCCATCTCCTCCTGCTCCCAATCCTGGAGATGCATCAAGCAGCACCACTTCTAGCCATGGAGGAGGAGGAGGATACTCATCTTCCCCTTATTGGCCTGAACTATATTTTCTTGCGGATTCCATTTCCATGCCCGAGCTATCTTAG 1527 0.4283 MPTPSDSVQPQSTTNRVDPFIYDTTESEHLETVISPPSQLNHATDISTPIASHPSTNSLTIPTSGIPGSHDTEPSYPIIPRRSTRVSHKPSYLRDYHCMLAQSANNLSSTTSRSPCCDENGLKKGPWTPEEDQKLVDHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIATHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSTLPYLLALANMTDLMDHHHYSLMDNNEHALRLHLEAAHLSKLQYLQYLLHSSSSSSSSNSLTTNNNNNNSFDQNATITDNNIIMEPSFILLNSSSISDNNNNNNVKESPVMECPQQLLDNINSASLLFCSSPTHEIGSSHCQPLHHHQNVMLSHHFLDPQQVPFSTSQSCLNNNSSTSELLQGQGNNFASISPQAAGGDHTVNIDGSSLWNNNNILSPSPPAPNPGDASSSTTSSHGGGGGYSSSPYWPELYFLADSISMPELS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1041 508 MobiDBLite consensus disorder prediction 1 20 - -
Aev08g1041 508 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 226 IPR017930 -
Aev08g1041 508 ProSiteProfiles Myb-like domain profile. 172 222 IPR001005 -
Aev08g1041 508 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 112 436 - -
Aev08g1041 508 CDD SANT 179 222 IPR001005 -
Aev08g1041 508 Gene3D - 179 226 - -
Aev08g1041 508 CDD SANT 126 171 IPR001005 -
Aev08g1041 508 MobiDBLite consensus disorder prediction 470 485 - -
Aev08g1041 508 ProSiteProfiles Myb-like domain profile. 119 171 IPR001005 -
Aev08g1041 508 MobiDBLite consensus disorder prediction 49 70 - -
Aev08g1041 508 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 112 436 - -
Aev08g1041 508 SMART sant 123 173 IPR001005 -
Aev08g1041 508 SMART sant 176 224 IPR001005 -
Aev08g1041 508 MobiDBLite consensus disorder prediction 49 77 - -
Aev08g1041 508 MobiDBLite consensus disorder prediction 444 485 - -
Aev08g1041 508 Gene3D - 123 176 - -
Aev08g1041 508 SUPERFAMILY Homeodomain-like 121 218 IPR009057 -
Aev08g1041 508 Pfam Myb-like DNA-binding domain 177 222 IPR001005 -
Aev08g1041 508 Pfam Myb-like DNA-binding domain 124 171 IPR001005 -
Aev08g1041 508 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 119 171 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1041 Aev-Chr8 6292898 6301011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1041 113 497 MYB Transcription Factor Family AT1G34670 50.636 3.42e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g1041 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1041 K09422 - gmx:100782792 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1041 08 6292898 6301011 Aev08g1041 08 6292898 6301011 ECH