Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1030 ATGACGAACCAGAATGTGGTGGGTCCTGATGTGATGCTTGTTGCATTAGCGTCCATTTCAAACTCCCCACTGTTTCCAAATGCAGCAGTGCGGGAATCAATGGCTCTGCTTGGTGGGTTCCTCAACCTCTCCCAGAGAAAACTTACCATGAAAGGCTTCGAGTTTGATGGTGAAAATGATGATGAGGCTGGGAATAATAATAATAAAGGTGGAAGAGCCAAAGTAGTTAACACCTGGATTGATTCAATGAGAGCCTCTTCTCCAACTCGTGCCAAATCCACTGCCTTAACTGCTGCTGATAACCAAGAAAATAACTCTTGGATTCTTTACCATCCTTCGGCGCTGAACATGTTTGATCAGATAATATATAGCATGAAAGGAAAACAGATTGTAACCTTTCTTGACTACGATGGGACTCTATCCCCTATTGTTGCAGATCCAGATAAAGCATTCATGTCCAGAAAGATGAGGGCAACGCTTAAAGACATAGCAAACCATTTTCCAACAGCTATAGTCACCGGAAGGTGCAGAGACAAGGTGTTTAACTTTGTGAAATTGGCGGAAGTGTACTACGCAGGAAGCCATGGGATGGACATCAAGGGGCCAACAAAAAGCCCAAGTGCTAAGAAAGGAAATGATAAAGCAGTGCTCTGCCAACCTGCAAGTAAATTCCTGCCAATGATCGAAGAGGTGTATAAGATCTTGTTAGAAAAAACAAAGTCAGTCCCAGGGGCTAAGGTAGAGAACAACAAGTTCTGTTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGTGTTGGGCAGCATTGGCAGAACAAGTTAGAGTGGTGCTCAATGACTACCCAAAGCTCAAGCTAACGCAAGGTAGAAAAGTGCTAGAGATTCGTCCAACCATCAAGTGGGATAAGGGCAATGCTCTTCAATTCTTGCTAACATCGCTAGGATATGAGAATTCCAATGACGTATTTCCGATCTATATTGGTGATGATCGAACGGATGAGGATGCTTTCAAGGTTTTGCGCAGCAGGGGTCAAGGGATGGGAATTCTTGTTTCTAGAGTTCCAAAAGACACGGCTGCTACCTACACCTTGAAAGACCCATCGGAGGTTGAGCAATTTTTGCGGCGTCTAGTGGATTGGAAAAGATCGAATAATACTACTGTGACTCCCTCAAGTGTATAG 1179 0.4411 MTNQNVVGPDVMLVALASISNSPLFPNAAVRESMALLGGFLNLSQRKLTMKGFEFDGENDDEAGNNNNKGGRAKVVNTWIDSMRASSPTRAKSTALTAADNQENNSWILYHPSALNMFDQIIYSMKGKQIVTFLDYDGTLSPIVADPDKAFMSRKMRATLKDIANHFPTAIVTGRCRDKVFNFVKLAEVYYAGSHGMDIKGPTKSPSAKKGNDKAVLCQPASKFLPMIEEVYKILLEKTKSVPGAKVENNKFCLSVHFRCVDEKCWAALAEQVRVVLNDYPKLKLTQGRKVLEIRPTIKWDKGNALQFLLTSLGYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGMGILVSRVPKDTAATYTLKDPSEVEQFLRRLVDWKRSNNTTVTPSSV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1030 392 TIGRFAM T6PP: trehalose-phosphatase 128 377 IPR003337 GO:0003824|GO:0005992
Aev08g1030 392 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 133 341 IPR006379 -
Aev08g1030 392 CDD HAD_TPP 133 369 - -
Aev08g1030 392 Pfam Trehalose-phosphatase 133 367 IPR003337 GO:0003824|GO:0005992
Aev08g1030 392 Gene3D - 245 388 IPR023214 -
Aev08g1030 392 Gene3D - 130 232 IPR023214 -
Aev08g1030 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 383 - -
Aev08g1030 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 383 IPR044651 GO:0004805|GO:0005992
Aev08g1030 392 SUPERFAMILY HAD-like 133 379 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1030 Aev-Chr8 6185841 6188249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1030 126 378 Trehalose Biosynthesis Gene Families AT1G70290 27.574 2.23e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1030 K01087 - gmx:100788641 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1030 08 6185841 6188249 Aev08g1030 08 6185841 6188249 ECH
Aev07g1876 07 19861306 19866306 Aev08g1030 08 6185841 6188249 PCT