Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1028 ATGGCAGCTATGATGGATTTCTACAGCAGCACACAACTTCATTCAGATCCCTTCAGGGGTGAGCTTATGGAAGCTCTTGAACCTTTTATGAAGAGTCCTTCCACAACACCCTCTCCTTCTTCTTCTCCTTCTCCACCTCCCTCTGCTACCTCTTCTCCTTCTTCAACCTCATCTCTACCTTCTACTTCTTACCCCCCTCTTCCCACCTTCTTCAACTCTTCTCCTTCATCAATCCCTGCACAACCCACTTTCTATTCTAATGGTTGCCCCGCCTCCATGACCCATCTATTTGCTAACGGGTCATCCGAAAGCTTAAACCTTTTCGGCTTCGGGCAACCAACTTCCTCCCTCGGCCTCAACCACCTAACCCCATCTCAGATCAATCAGATCCAAGCCCAGATCCAGCTCCAGGCCCAGGCACAACCATGGCAGCAGAACAACTTGTATCACAACACCCCCACCACCACCACCCTCAGCTTCCTCGGCCCGAAGCCCATCCCCATGAAGCACGTGGGCGTGCCACCAAAGCCCACGAAGCTGTACAGAGGGGTGAGGCAGAGGCACTGGGGGAAGTGGGTCGCCGAGATCAGACTCCCCAAAAACAGAACAAGGCTCTGGCTCGGCACCTTCGACACCGCTGAGGAAGCTGCTTTGGCGTACGACAAGGCCGCTTACAAGCTCCGAGGTGACTTCGCAAGGCTCAACTTCCCCAATCTGAGACACCAAGGTTCCTCTGTTGGGGGAGACTTCGGCGAGTACAAGCCTCTTCACTCCTCTGTTGACGCCAAGCTTCAGGCCATATGTGAAGGCCTGGCTGAGATGCAGAAACAGGGGAAGTCAGAGAAGGCTTCAACGGCGTCGTCTAAGAGGTCGTCTGCGGGGAAATCGAAAGCCGGTTCCAAGGTTGGTAAGACCCAGCAGCCAGAGGCTGTAACCAGTACCGAGGATGTCGGCGGTGACGTGAAGAAGGGGTTGGAGAATTCTTGCAAGGTGGAAGCTGCTTCGTTGTCTCCGGTGATGACAGAGAGTGAGGGATCTGAGAATTCCTCGCCTCTTTCGGATCTGACCTTTGCTGATGTTTATGAACCAGAGTGGGAGGGTGCCTCGGATAATTTGAATCTTCAGAAGTACCCTTCCTATGAGATTGATTGGGATTCTCTGTGA 1164 0.5335 MAAMMDFYSSTQLHSDPFRGELMEALEPFMKSPSTTPSPSSSPSPPPSATSSPSSTSSLPSTSYPPLPTFFNSSPSSIPAQPTFYSNGCPASMTHLFANGSSESLNLFGFGQPTSSLGLNHLTPSQINQIQAQIQLQAQAQPWQQNNLYHNTPTTTTLSFLGPKPIPMKHVGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVGGDFGEYKPLHSSVDAKLQAICEGLAEMQKQGKSEKASTASSKRSSAGKSKAGSKVGKTQQPEAVTSTEDVGGDVKKGLENSCKVEAASLSPVMTESEGSENSSPLSDLTFADVYEPEWEGASDNLNLQKYPSYEIDWDSL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1028 387 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 4 386 - -
Aev08g1028 387 MobiDBLite consensus disorder prediction 275 353 - -
Aev08g1028 387 MobiDBLite consensus disorder prediction 339 353 - -
Aev08g1028 387 SUPERFAMILY DNA-binding domain 180 238 IPR016177 GO:0003677
Aev08g1028 387 MobiDBLite consensus disorder prediction 278 313 - -
Aev08g1028 387 CDD AP2 179 239 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 Pfam AP2 domain 181 229 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 SMART rav1_2 180 243 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 ProSiteProfiles AP2/ERF domain profile. 180 237 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 Gene3D AP2/ERF domain 180 238 IPR036955 GO:0003700|GO:0006355
Aev08g1028 387 PRINTS Ethylene responsive element binding protein signature 203 219 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 PRINTS Ethylene responsive element binding protein signature 181 192 IPR001471 GO:0003700|GO:0006355
Aev08g1028 387 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 386 - -
Aev08g1028 387 MobiDBLite consensus disorder prediction 19 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1028 Aev-Chr8 6174652 6175815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1028 1 387 AP2-EREBP Transcription Factor Family AT1G78080 47.870 5.34e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev08g1028 AP2 9.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1028 K09286 - gmx:732559 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1028 08 6174652 6175815 Aev08g1028 08 6174652 6175815 ECH
Aev07g1872 07 19822499 19823560 Aev08g1028 08 6174652 6175815 PCT