Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1005 ATGGATGTATTTGAGCCATTCCAGCAAGTTAGCATGTGGGGTGACAACTTTAAGGTTGATGGTGGCCTGAATTCAATTACTTCCCCAATGTTACTGGTGAACACTACTACCATGGAGAATAAGTCAGAATATATTCCTCCTCCTCCTCATGAATTAAGGGAACCTTCCAGAGAAAATCAAGGGACTATGAATAAAGATGTTAGTAAGGTGCTAAGACGCCTAGCTCAGAATCGAGAAGCTGCTCGGAAAAGTCGGCTTCGGAAAAAGGCTTATGTTCAACAATTAGAGAGTAGCCGTTTGAAGCTAATGCAGTTGGAGATAGAGATTGGTAAAGCAAGAAAACAGGGTATGTACTTTGGCAGTCCATTGGATGCTACTAGTTATATGGGATCACCTGCACCAATAAACCCAGGGATTGTTTCATTTGAAATTGAATACGGACATTGGATTGAAGAGCTAAATAAGCAGAACGAAGAACTTAGAAATGCATTTCAAACTCAGGCACCTGATGTGCAACTCCAACTAGTTGTTCAGAGTGTCTTGAACCATTACTCAGATCTTTTCAGAATGAAAGCAGAAGCAGCAAAGGCTGATATCTTCTATGTAATCAGCGGCGTGTGGAAATCATCGGTAGAGCGCCTTTTCCTCTGGATTGGAGGATCCCGGCCGTCGCAGCTTGTAAATATAATTGTGCCACAACTTGAGGCTCCTTTGACAGATCAACAAAGGGCTAGTATCAACAACCTCAGGCTATCATCTCAGCAAGCAGAAGATGCTCTTTCACAAGGATTGGATAAACTGCAGCAGGGCCTTGTCCACAACATAGCACTTGATCCTTTGGCTGTAGGAAACTTATTGGGGTTTCAGATGGCTGTTGCCATGGAGAAAATTGAGGCACTAGAAGGCTTTCTAAACCAGGCAGATCACTTGAGGAGAACAACATTGATGCGCATGTCTGGAATCCTAACAACACAGCAAGCTGCTCAGGGATTGATTGCTCTTGGAGAATACTTTCATCGACTTCGTTCTCTTAGTTCTCATTGGGCCACTCGTCCATCTCATCCTCTCTAG 1071 0.4351 MDVFEPFQQVSMWGDNFKVDGGLNSITSPMLLVNTTTMENKSEYIPPPPHELREPSRENQGTMNKDVSKVLRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEIEIGKARKQGMYFGSPLDATSYMGSPAPINPGIVSFEIEYGHWIEELNKQNEELRNAFQTQAPDVQLQLVVQSVLNHYSDLFRMKAEAAKADIFYVISGVWKSSVERLFLWIGGSRPSQLVNIIVPQLEAPLTDQQRASINNLRLSSQQAEDALSQGLDKLQQGLVHNIALDPLAVGNLLGFQMAVAMEKIEALEGFLNQADHLRRTTLMRMSGILTTQQAAQGLIALGEYFHRLRSLSSHWATRPSHPL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1005 356 SUPERFAMILY Leucine zipper domain 69 102 IPR046347 GO:0003700|GO:0006355
Aev08g1005 356 Coils Coil 88 115 - -
Aev08g1005 356 MobiDBLite consensus disorder prediction 43 63 - -
Aev08g1005 356 PANTHER TRANSCRIPTION FACTOR TGA9 1 353 - -
Aev08g1005 356 ProSiteProfiles DOG1 domain profile. 139 351 IPR025422 GO:0006351|GO:0043565
Aev08g1005 356 SMART brlzneu 65 125 IPR004827 GO:0003700|GO:0006355
Aev08g1005 356 Pfam Seed dormancy control 158 231 IPR025422 GO:0006351|GO:0043565
Aev08g1005 356 CDD bZIP_HBP1b-like 69 121 - -
Aev08g1005 356 Gene3D - 68 117 - -
Aev08g1005 356 Pfam bZIP transcription factor 69 97 IPR004827 GO:0003700|GO:0006355
Aev08g1005 356 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Aev08g1005 356 MobiDBLite consensus disorder prediction 46 60 - -
Aev08g1005 356 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1005 Aev-Chr8 6000189 6002039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1005 1 352 Calmodulin-binding Proteins AT1G22070 53.846 7.22e-127 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev08g1005 DOG1 1.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g1005 K14431 - gmx:100794268 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g1005 08 6000189 6002039 Aev08g1005 08 6000189 6002039 ECH
Aev07g1838 07 19471456 19481971 Aev08g1005 08 6000189 6002039 PCT