Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0998 ATGGTTCGCCGAGCGCCGCCACGGTCTCCGCCGCAGCCCAGCCCCATAGACGTCAAAATCTGGAGGGCCTGCGCCGGAGGTAGTGTTCGAACCCCGGAGCTCAACTCTAGGGTTTACTACTTCCCTCAGGGGCACGTGGAGCAGGCCTCTTCTCCACCGCGCAACCTCTCTCCTCACATCTTTCTGCGGCCATTCCTCTTATGCCGCGTAACCGCTGTTAGCTTCTTGGCCGATCCTGACACTGACGAGGTGTTCGCCAAGCTCATCCTCCACCCGATCACCATCACTCACCCGCTGCTTCAGTCCTCTTCTGCCGGCGCTGACACTGTTAACGGCGAGGCTCCGCCGGCTGCTGCTGGCGATGACGGCGATAAGATAGTATCTTTCGCCAAGACTCTGACGCCGTCTGATGCCAACAACGGCGGCGGATTCTCCGTCCCGAGGCAATGTGCTGAGGCGATATTCCCTCCGCTGAACTTCGAGGACGATCCGCCGGTGCAGAAGCTCTCCGTGACTGACGTCCATGGCGTCACATGGGAGTTTCGCCACATCTATCGCGGGACTCCCCGGCGCCACCTGCTAACCACGGGATGGAGCAAGTTCGTCAACAGCAAGAGTCTCATCTCCGACGACTCCGTCGTCTTCATGAAGGACTCCGGCGGGAGGATGTTCGTCGGGATCCGCCGTTCGGGGAATTCAAACCTCTCCCTGAAAGACGGCGGCGGCGACAAGATGCCGGAGTGGCTGGCGGAGATCGTTGGGCTGGGGAACAACGTTGACGCCGAGGAGGCCAACAAGAAGAGGAACGAGGAGGAGGAAGAGGAGGTGGCGGCGGAGGAGTTCGGGAGTAACAGGAGGGGGAGGGTGCCAGCGAAGGCGGTAGCGGAGGCGATGGAGCTGGCGGCGCAGAACAAGCCGTTCGAGGTGGTTTACTACCCTCGGATCGGGCGGTCGGAGTTTGTGGTGAGAGCGGAGGTAGTGGACGAATACATGAGCATATGTTGGCGTCCAGGGATGAGGGTGAAGATCTCAAAGGAGAGTGAGGATTCGACGAGGGTGACGTGGCATCAGGGTGCTGTGTCTGCTGTCTGCACCAATTCCGATCCTCAATGGCGATCTTCTCCTTGGCGCATGGTTCAGGTGGCCTGGGATGAGCCTGAATCCTTGAGGAATGTGAATTTGGTGAGCCCATGGGAGATCATACCTCTTTCCATCACACCTCCAGTTCCAATTCCACTTGCTCCTCCAATTATTCATGAAGTAGTTCCACCGCCTCCGAAGAAGTTTAGAGCAGATGAGGCAGACTTGTATTATCGTGTGACAGGGTTCTCTGATCATCCACCCACCATGGCACAAGTGAATCGATCACTCTTGAGTTATGGTATCACTTATCCTGCTGGCATGCAGGGAGCCAGGCATGATTTACTTTCCGCACCTACTTATCCCAACTTTTCAAACAACAACAATTCTTTTCCTCATCATCCGTATATGGGCAACAACACAGCACAACCTAGGCCTCTTACTCTGCGCACAGAGATAAACATTTGGGGTCCTCCATCAGAGGACTTATCACCGGATAGCCAACGTAGTATACTTTCCTCTGTCTCAGACTCTTGTGGAACCCCTCCCAACTGCAACACACTGGTGGTGAATAAAGCTGTTGGCTCTGGTTCAATTCGGCTATTTGGTGCAATCATTCAAGGAGAAAACAGAGGTGATGAAGGTGGCCGCGTGGATGGTACTGCCCATGGCCCCACAGGAGGAGATGACAACGGAACTCATGCCAAAAAGCCTCAACATCAGTGA 1806 0.5581 MVRRAPPRSPPQPSPIDVKIWRACAGGSVRTPELNSRVYYFPQGHVEQASSPPRNLSPHIFLRPFLLCRVTAVSFLADPDTDEVFAKLILHPITITHPLLQSSSAGADTVNGEAPPAAAGDDGDKIVSFAKTLTPSDANNGGGFSVPRQCAEAIFPPLNFEDDPPVQKLSVTDVHGVTWEFRHIYRGTPRRHLLTTGWSKFVNSKSLISDDSVVFMKDSGGRMFVGIRRSGNSNLSLKDGGGDKMPEWLAEIVGLGNNVDAEEANKKRNEEEEEEVAAEEFGSNRRGRVPAKAVAEAMELAAQNKPFEVVYYPRIGRSEFVVRAEVVDEYMSICWRPGMRVKISKESEDSTRVTWHQGAVSAVCTNSDPQWRSSPWRMVQVAWDEPESLRNVNLVSPWEIIPLSITPPVPIPLAPPIIHEVVPPPPKKFRADEADLYYRVTGFSDHPPTMAQVNRSLLSYGITYPAGMQGARHDLLSAPTYPNFSNNNNSFPHHPYMGNNTAQPRPLTLRTEINIWGPPSEDLSPDSQRSILSSVSDSCGTPPNCNTLVVNKAVGSGSIRLFGAIIQGENRGDEGGRVDGTAHGPTGGDDNGTHAKKPQHQ* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0998 601 MobiDBLite consensus disorder prediction 569 601 - -
Aev08g0998 601 Pfam Auxin response factor 297 380 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev08g0998 601 Gene3D - 126 230 IPR015300 -
Aev08g0998 601 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 580 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev08g0998 601 CDD B3_DNA 128 229 IPR003340 GO:0003677
Aev08g0998 601 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Aev08g0998 601 SMART B3_2 129 231 IPR003340 GO:0003677
Aev08g0998 601 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Aev08g0998 601 Coils Coil 259 281 - -
Aev08g0998 601 PANTHER AUXIN RESPONSE FACTOR 9 580 - -
Aev08g0998 601 MobiDBLite consensus disorder prediction 521 538 - -
Aev08g0998 601 MobiDBLite consensus disorder prediction 518 538 - -
Aev08g0998 601 MobiDBLite consensus disorder prediction 263 283 - -
Aev08g0998 601 Gene3D - 335 407 - -
Aev08g0998 601 SUPERFAMILY DNA-binding pseudobarrel domain 124 231 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0998 Aev-Chr8 5963174 5965766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0998 16 575 B3 DNA Binding Superfamily AT1G77850 43.478 2.07e-135 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev08g0998 B3 1.9e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0998 - - aprc:113852457 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0998 08 5963174 5965766 Aev08g0998 08 5963174 5965766 ECH
Aev07g1831 07 19439434 19446649 Aev08g0998 08 5963174 5965766 PCT