Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0994 ATGCTCTCGATTTTGTGCACCTTGTTGTTGCCGGCGATGACTGGTGGTGGCAGATGCCTCCGGCGGAAGAACATGACAGCTTCCGGCGCACAAGAGCGGGAACGAGGCACCGCCGAGGAGAGGCCGCCGTTGCCGGAGGTTTCTCCGATGGCTCCGCCGGGAACTAAGGCGGAATTTGCTGCATTCGAAATTGACTACTTTTCGCAGGCGAGGAAGGCGCTGAGCGAGCACTCGCCGTTCGACGATGAGGCTTCGACGTCCGGTGGAGCGGTTAATACTCTGCCTAGTGGGTTGTCTAGCTTGTTGAACCGCCACGGTGGCGACAACCGGCGGCGGCATAAGAAGTCTCACTCCGGTGGGGATAAGAAGAAGAAATCGTCGAGGGCGAGCGAGAAGCCACACGCTTCAAACATTTGGGCTGAGACGGAGGAGTACTTCAGGGACTTGACTTTATCTGATATTGATACTTTGGTGCAGGCTTCTTCATTGTCTAGTTTAGGTTCTCGTGAGTGTTTCTTAATTCCAAGACTCAGTGTAGTTAGTTGTAGTGAGGATGAAAAGAAGGGTGCTCCACAGGTAGTTGGTGTTGAGGATGAAAAGAAGTGTGATGAAGTGAGAAATGGTGAGTGTTTATTGGGAATTGAGTCAGTGGACAATGTTGCTGATGAAAAAGATTTGCCTGAGGATAACAATAATGGTTCCTGTGATAGTTTAGAGTGGCTCTTAGGTTGTAGGAGTAAGGTTTCTTTAACTTCTGAGCGCCCTACAAAGAAAAGAAAGCTTTTGGGTGGGGATGCTGGTTTGCAGAAAGTTCTAATGACTAGTCCTTGTGATGTGGAGCAACCCTTTTGCCATTATTGCGGGAAGGGTGAGAGTGGCAGAGATTCAAACCGGTTGGTTGTCTGTGCTTCTTGTAAAGTTGCAGTTCACCAGAAGTGCTATGGTGTGCAAGATGGCACGGATGAGGCTTGGTTGTGCTCATGGTGTAAGGAAAAGGGTAGTGTTGATGAGTCGATGAATCCCTGTGTGCTTTGCCCGAATAATGGTGGCGCACTGAAACCAGTTAGTAGCAATGTGGAAGGTGCTGGGTCTGTGGAGTTTGTGCACTTGTTTTGTGGTCTGTGGATGCCCGAGGTTTATATAGATGATCTGAAGAAGATGGAGCCTGTTATGAATGTAGCAGGAATCAAGGAAACCAGGAGAAAATTGGTGTGTAATGTTTGCAAATTGAAGTGTGGTGCATGTGTTCGATGTAGCCATGGATCCTGCCGAACTTCTTTCCACCCTTTATGTGCCAGAGAAGCTAGACATAGGATGGAGATTTGGGCCAAGTATGGTGATGATAATGTTGAGTTGCGCGGTTTTTGCTTGAAACACTCGGATCTACAGGATAACAGGAGCATCTTGCCATCAGGAGACTCTGTTGCTGTTGGCAGTGAATTTTCTGAAGCTAACGGCTTTCCACTGACATTGCCAGTGAATAGTGAAGACAATTTGAGAATCAGTTGCAGGAATGGAGGAGTAATTTCCAATGGCAGTCTAGACAAGTTGAACCATGATGAACTACAAGATGGAGGATTGCCTGATAGTATTGTAAGTGCCCATGATATGTTGGGATGTGATGCTGTGCATCAGCATAATGATGGAGCAGTAGGGAAGAGCAAAGAGAATGTAGATGCATCCGATTCCCTCAGTTTTGCTATTGTCTTGAAGAAGTTGATAGATCGAGGGAAAGTTGATGTAAAGGATGTAGCAATGGAGATTGGCATTTCACCAGATACATTAACAGCAAATATCAATGAAGCTTATATGGACCCTGATTTGCTTGATAAAATAGTCAATTGGTTAAAAGCCCATGTATACACTAGTGCATTTCAGAAAGGTTTAAAAGTCAAATTCAAACAACCCAATGCGCCCAAGGATCAAAGTGGAGCTGCAGATGGTTCTGATACATTACCGATATCAGATTCAGGTTTGTTGGATCCTGTTGCTGTTAAGTCGGTACCTCCAAGGAGGAGAACTGTCAGCAACATTAGGATTTTGAAGGATAATAAAGTGATATGTTCATCTGAGGGGGTTACTAGTGAGAATGGGACGTCAATTGATAATGTCAGAGTCAGTCAGCCAGACCATGAAAATCCTGGAAGCTCCACTGAAGCATCTCCAGATGCAACTGTGATGAATTTGACAATGGCTGAGGAAACCTCTCCTAAAGCTGAAGGGAATGCTGATAAGCTCTTCAAATCCAACTTATCAGAAGAAAAGTCCACTGTTAGTTTGCAGAATGATTATGTGCTTTCTGATCGCCACTGCCCTGTTTATTCTGCTTCAGAATTACCTGATTCTGGTTCCATGAAGGCAGAAGCAATCTCTAGTTACATTCACCCATACATCAAGAAGATGTTGCAGCAGATTCATAATGGGGTTCTCTTGCAGAACATTACATGTCCAAGGGAGGAGGGAATTTCTTCTTTGGTTGAGTCCTCTGGGTCTAGTGGCTGCTCAAATAGTCAAAATCAGCAATTAACAAGCATTGAATGTTCCAGTTCTGATCAAGTACATATGGAACAGTTACATGGAGCTGAAAAGATGGGGCTTTTGGAATTTTCTCCAGAAGATGAAATTGAGGGGGAATTTATCTATTTACAGTATAGATTATTGCGTAATGCAGTTGCAAGAAAGAGGTTAACTGATAACTTAATCTGCAATGTTGCCAAGAGTTTGCCGCATGAGATTGATGCAGCACATCAGCGAAGATGGGATTCTGTGATCGTTAATCAATATCTGCGAGATCTTAGGGAGGCAAAAAAGCAGGGCAGGAAAGAAAAAAGGCACAAGGAAGCACAGGCCGTGCTTGCTGCTGCAACAGCTGCTGCTGCAGCATCTTCCAGAGTGTCCTCTTTCCGGAAAGACTCTTTAGATGAATCTATGCAACAGGAGAATTTGTTAAAGTTGGATACTTCAAGTGGGAGGTCTGGTGCTTTATCTCAGCCGATGCCACGAGCCAAAGAGACACTTTCAAGAGTTGCTGTGACAAGAACTTCATCAGAGAAATATTCGGATTTTGGTCTGCCATCTGCAGATTTGTCTAAGGAGCAAGCTAGATCATGCGATATCTGCAGACGATCTGACACTATGTTAAACCCCATTCTTATCTGCTCTGGTTGCAAGGTTGCGGTGCACTTGGATTGCTATCGTAGTGTGAAAGAGACAACAGGTCCTTGGTACTGTGAATTGTGTGAAGACTTATCTTCTAGAAGCTCCGTGACTTCTGCTATCAATTTCTGGGAGAAGCCTGTCACAGAATGTGCTCTGTGTGGTGGTACTTCTGGAGCTTTCAGAAAGTCTTCTGATGGTCAATGGGTGCATGCCTTCTGTGCTGAGTGGGCCTTCGAGTCGAAATTCAGAAGAGGACAAATTAATGCTGTTGAAGGGATGGAGACTCTGCTGAAGGGAGTTGATGCATGTTGCATCTGCCACCGTAGGCATGGTGTTTGCATGAAGTGTTGCTATGGCAATTGTCAAACAACATTCCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGACTGCTGGTGGCAAATCACAACACAGGGCTTACTGTGAAAAGCATAGTTTGGAGCAGAAGGCAAAGTCTGAAAGTCATAAACATGGAATTGAAGAGTTTAAAAGTATGAAGCAAATTCGGGTGGAGCTTGAGAAACTACGTCTCCTTTGCGAGAGAATTGTCAAACGTGAAAAGTTAAAGAGGGAATTAGTTCTTTGTTCGCATGACATACTTGCCTTCAAGAGAGATCATGTCGCTAGGTCTGTGCTGGCCCGTAGCCCTTTTATCCTGCCAGATGTTAGCTCAGAATCAGCTACAACATCCCTTAAAGGTAATACAGAGGGATACAGGTCATGCAGCGATGCAGTTCAAAGATCTGATGACATAACTGTGGACAGCTCTGTTTCTGCTATAAATCGTGTCAGAGTTGCTGTATCCATAGACACCGACCCCAAATTGGAAGATGACTGCTCGACCTCACAAAGCCATTATAATCACAATATGCCACAGAGGATGCAATTTTCTGGCAAGCAGATTCCTCGTAGAGCTTCTGCTATGTCACGTAATCTCTCTGATGTTGGAGGATTGAGATCAAAATCTAGAAAGCATGCAGAGACATTTGGAAAGGAGCTCGTTATGACATCAGATGAAGCATCTATGAAGAACTTAAGGTTACCGAAAGGATATGCATATGTTCCTGCTGATTGCCTGTCAACTGATAAGCAGTCAAACGAGGATGAATATGCCGGTGGGCCGGTGTATCCGGAGATATATTTGAGAATGGCAAATTGTGGAGTCAGAGCTCCGGACACTGTATCTGAGAAGGCGGCATTCTGCCCTGGCAGGGAGGGAAGTTTTGCTAGCAGTGTTGTACATTCATCATGA 4443 0.449 MLSILCTLLLPAMTGGGRCLRRKNMTASGAQERERGTAEERPPLPEVSPMAPPGTKAEFAAFEIDYFSQARKALSEHSPFDDEASTSGGAVNTLPSGLSSLLNRHGGDNRRRHKKSHSGGDKKKKSSRASEKPHASNIWAETEEYFRDLTLSDIDTLVQASSLSSLGSRECFLIPRLSVVSCSEDEKKGAPQVVGVEDEKKCDEVRNGECLLGIESVDNVADEKDLPEDNNNGSCDSLEWLLGCRSKVSLTSERPTKKRKLLGGDAGLQKVLMTSPCDVEQPFCHYCGKGESGRDSNRLVVCASCKVAVHQKCYGVQDGTDEAWLCSWCKEKGSVDESMNPCVLCPNNGGALKPVSSNVEGAGSVEFVHLFCGLWMPEVYIDDLKKMEPVMNVAGIKETRRKLVCNVCKLKCGACVRCSHGSCRTSFHPLCAREARHRMEIWAKYGDDNVELRGFCLKHSDLQDNRSILPSGDSVAVGSEFSEANGFPLTLPVNSEDNLRISCRNGGVISNGSLDKLNHDELQDGGLPDSIVSAHDMLGCDAVHQHNDGAVGKSKENVDASDSLSFAIVLKKLIDRGKVDVKDVAMEIGISPDTLTANINEAYMDPDLLDKIVNWLKAHVYTSAFQKGLKVKFKQPNAPKDQSGAADGSDTLPISDSGLLDPVAVKSVPPRRRTVSNIRILKDNKVICSSEGVTSENGTSIDNVRVSQPDHENPGSSTEASPDATVMNLTMAEETSPKAEGNADKLFKSNLSEEKSTVSLQNDYVLSDRHCPVYSASELPDSGSMKAEAISSYIHPYIKKMLQQIHNGVLLQNITCPREEGISSLVESSGSSGCSNSQNQQLTSIECSSSDQVHMEQLHGAEKMGLLEFSPEDEIEGEFIYLQYRLLRNAVARKRLTDNLICNVAKSLPHEIDAAHQRRWDSVIVNQYLRDLREAKKQGRKEKRHKEAQAVLAAATAAAAASSRVSSFRKDSLDESMQQENLLKLDTSSGRSGALSQPMPRAKETLSRVAVTRTSSEKYSDFGLPSADLSKEQARSCDICRRSDTMLNPILICSGCKVAVHLDCYRSVKETTGPWYCELCEDLSSRSSVTSAINFWEKPVTECALCGGTSGAFRKSSDGQWVHAFCAEWAFESKFRRGQINAVEGMETLLKGVDACCICHRRHGVCMKCCYGNCQTTFHPSCARSAGFYMNVRTAGGKSQHRAYCEKHSLEQKAKSESHKHGIEEFKSMKQIRVELEKLRLLCERIVKREKLKRELVLCSHDILAFKRDHVARSVLARSPFILPDVSSESATTSLKGNTEGYRSCSDAVQRSDDITVDSSVSAINRVRVAVSIDTDPKLEDDCSTSQSHYNHNMPQRMQFSGKQIPRRASAMSRNLSDVGGLRSKSRKHAETFGKELVMTSDEASMKNLRLPKGYAYVPADCLSTDKQSNEDEYAGGPVYPEIYLRMANCGVRAPDTVSEKAAFCPGREGSFASSVVHSS* 1481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0994 1480 ProSiteProfiles Zinc finger PHD-type profile. 281 332 IPR019787 -
Aev08g0994 1480 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 220 468 - -
Aev08g0994 1480 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 811 1432 - -
Aev08g0994 1480 ProSitePatterns Zinc finger PHD-type signature. 284 329 IPR019786 -
Aev08g0994 1480 Coils Coil 1229 1249 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 77 136 - -
Aev08g0994 1480 Pfam PHD-finger 1048 1081 - -
Aev08g0994 1480 Pfam PHD-finger 297 330 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 988 1007 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 80 103 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 692 724 - -
Aev08g0994 1480 SMART PHD_3 283 330 IPR001965 -
Aev08g0994 1480 SMART PHD_3 1155 1209 IPR001965 -
Aev08g0994 1480 SMART PHD_3 1036 1081 IPR001965 -
Aev08g0994 1480 SMART PHD_3 404 460 IPR001965 -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 635 654 - -
Aev08g0994 1480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 334 IPR013083 -
Aev08g0994 1480 SUPERFAMILY FYVE/PHD zinc finger 1032 1081 IPR011011 -
Aev08g0994 1480 SUPERFAMILY FYVE/PHD zinc finger 275 335 IPR011011 -
Aev08g0994 1480 ProSiteProfiles Extended PHD (ePHD) domain profile. 1100 1209 IPR034732 -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 25 54 - -
Aev08g0994 1480 PANTHER PHD FINGER PROTEINS 220 468 - -
Aev08g0994 1480 PANTHER PHD FINGER PROTEINS 811 1432 - -
Aev08g0994 1480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1014 1091 IPR013083 -
Aev08g0994 1480 ProSiteProfiles Extended PHD (ePHD) domain profile. 339 460 IPR034732 -
Aev08g0994 1480 Pfam PHD-zinc-finger like domain 341 459 - -
Aev08g0994 1480 Pfam PHD-zinc-finger like domain 1102 1208 - -
Aev08g0994 1480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 335 462 IPR013083 -
Aev08g0994 1480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1098 1210 IPR013083 -
Aev08g0994 1480 CDD ePHD 1103 1208 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 27 41 - -
Aev08g0994 1480 ProSitePatterns Zinc finger PHD-type signature. 1037 1080 IPR019786 -
Aev08g0994 1480 Coils Coil 929 949 - -
Aev08g0994 1480 MobiDBLite consensus disorder prediction 107 122 - -
Aev08g0994 1480 ProSiteProfiles Zinc finger PHD-type profile. 1034 1083 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0994 293 466 C2H2 Transcription Factor Family AT3G14740 28.249 1.70e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev08g0994 zf-HC5HC2H_2 4.4e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0994 - - aip:107606101 2041.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0994 08 5933287 5941871 Aev08g0994 08 5933287 5941871 ECH