Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0980 ATGGAGGAATTACAGAGTGCTCTGGAGGATCGTAGCTTGACAGTTTCCACCGTCGCAGAAAAGGGTCGTTCTCTCTTTGCAACAAGGGATTTCTACCCTGGGGAGGTAATCATAAGTCAAGAGCCTTATGTTTGTGTTCCAAATAACTCCGTAGCCCAGAAAAGGTGTGATGGGTGTTTGTCAACAACTAACCTTAGGAAGTGTTCCCGTTGCCAAGTTGTGTGGTATTGTGGAAGCACATGTCAGAAGTCTGAGTGGAAGTTGCATCGACTTGAATGTGAGGTTCTATCTAGGCTTGACAATGCCAAGAGAAAATCTGTCACGCCATCTATTCGACTGATGGTGAAACTTCATCTTCGAAGGAAGTTGCAAAATGAGAAGATCATCCCAAGCACTGCTATGGACAACTACAACTTGGTGGAGGGATTAGTTTCTCACATGTCTGACATCACTGAGGAGCAGCTGCTGCTGTATGCACAGATGGGTAATCTAGTAAACTTGATTCTACAGTGGCCTGAAATCAACATAAAAGAGATTGCAGAGAACTTTTCCAAGTTTGCATGCAATGCGCATACCATTTGTGACAGTGAGTTGAGACCTTTGGGGACAGGATTGTATCCTGTTATTTCCATTATCAATCACAGCTGCTTGCCCAATTCTGTGTTGGTTTTTGAGGGAAAGTCAGCATCAGTACGTGCCGTGCAACATGTTCGCAAAGGTACTGAGGTGCTTATTAGTTATATAGAGACTGCTGGAAGCACTATGACTCGACAGAAAGCTCTCAAAGAACAGTACCTGTTCACTTGTACATGTCCCCGCTGTTCTAAAGTGGGCCAGTATGATGATATCCGAGAAAGTGCAATTCTAGAAGGATACAGATGCAAAAATGAAAAATGTGATGGTTTCTTGCTTCGAACTACTGATGGAAATGGATTCCAATGCCAACAATGTGGATTGGTTAGAGAGAAGGAAGAGATAAAGAAAATTGCAACCGACATTAAATCGCTATCAGAAGAAGAGACTTCTAAGCTTTTGTCTGCTGCCTATTATCAAGAAGCTATTTCCATATATAAAATGATTGAGAAACTGCAAACAAAACTCTATCATCCTTTCTCAATCAGCTTGATGCAAACTAGAGAGAAGATTTTGAAGTCATTGATGGAGCTGGAACATTGGAATGAAGCTTTAGCATACTGCAAATTGACCATACCAGTCTATCAAAGAGTATATCCAGCAATACACCCTCTACTTGGCTTGCAATATTATACTTGTGGAAAACTCGAATGGTATCTAGGAGACACAGAGGAAGCTGTTAAATCACTGACCAAGGCATTGGATATACTAAGGATAACTCATGGGACAAACACACCTTTCATGAAGGAGCTTTTGATTAAGTTGGAAGAAGCACGTGCTGAAGCCTCTCACAAATGCTCCTCCAAAGAGGAGGAAGAGGAGTAG 1458 0.4198 MEELQSALEDRSLTVSTVAEKGRSLFATRDFYPGEVIISQEPYVCVPNNSVAQKRCDGCLSTTNLRKCSRCQVVWYCGSTCQKSEWKLHRLECEVLSRLDNAKRKSVTPSIRLMVKLHLRRKLQNEKIIPSTAMDNYNLVEGLVSHMSDITEEQLLLYAQMGNLVNLILQWPEINIKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGKSASVRAVQHVRKGTEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCSKVGQYDDIRESAILEGYRCKNEKCDGFLLRTTDGNGFQCQQCGLVREKEEIKKIATDIKSLSEEETSKLLSAAYYQEAISIYKMIEKLQTKLYHPFSISLMQTREKILKSLMELEHWNEALAYCKLTIPVYQRVYPAIHPLLGLQYYTCGKLEWYLGDTEEAVKSLTKALDILRITHGTNTPFMKELLIKLEEARAEASHKCSSKEEEEE* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0980 485 Coils Coil 463 483 - -
Aev08g0980 485 Pfam MYND finger 56 93 IPR002893 -
Aev08g0980 485 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 1 473 - -
Aev08g0980 485 SUPERFAMILY TPR-like 347 447 IPR011990 GO:0005515
Aev08g0980 485 ProSitePatterns Zinc finger MYND-type signature. 56 93 IPR002893 -
Aev08g0980 485 ProSiteProfiles Zinc finger MYND-type profile. 56 93 IPR002893 -
Aev08g0980 485 Gene3D - 106 190 - -
Aev08g0980 485 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR1 1 473 - -
Aev08g0980 485 Coils Coil 319 339 - -
Aev08g0980 485 ProSiteProfiles SET domain profile. 11 248 IPR001214 GO:0005515
Aev08g0980 485 Gene3D Tetratricopeptide repeat domain 402 481 IPR011990 GO:0005515
Aev08g0980 485 Pfam SET domain 22 247 IPR001214 GO:0005515
Aev08g0980 485 Gene3D SET domain 24 274 IPR046341 -
Aev08g0980 485 Gene3D - 55 105 - -
Aev08g0980 485 SMART set_7 11 254 IPR001214 GO:0005515
Aev08g0980 485 SUPERFAMILY SET domain 12 247 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev08g0980 SET 5.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0980 K11426 - gmx:100789518 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0980 08 5820215 5824268 Aev08g0980 08 5820215 5824268 ECH