Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0963 ATGGGCAACAACAACAACAACCACCACCACCCAGGAGGTTCCAGCTGTACTGGTGCTTCCAGTGCAACCGCATGGCACGCGTCGCAGCCGATAACCCCACGGAGGTCACGTGCCCACGCTGCTTCGGCCAATTCCTCGTCGAAATCAACATCCCAACGCCAAGGCTCTTCCTTGACTTCACCAACCACGACCCTTCGCCTGAAGCCCGTTTGCTCGAAGCACTTTCCCTCATGCTCGATCCCCCCATCCGCCGCACCCCCGCCCAACCCCACCGCCGCCGCCGTCCCCACGCCGACGACCCCACAACACTCCAAGAGCTCCTCCCCTGCGCGCCACCGTCCCAGACCCCAAGGTTCGGAACCCGAACCTGCCCGCCCCCGAACCTGGATCATTCTCCAACCCATAGGCGACCCTTCCTCTAACCCCTTGGAACCCATTGTTCCGCGGCGAGAGGGCCCAATTCCACGTGGCGCGAACCCAAGGGACTATTATTTGGGGCCTGGGCTTAACGAGCTGATCGAGCAGCTGACAGAGAACGACAGGCCCGGGCCGGCGCCGGCGCCGGAGAGGGCCATTAATGGTATCCCAACGGTGAAGATTGAGAGCGGTCACTTGAAGGAGAATTCGCAGTGTCCAGTGTGTCAGGAGGAGTTTGAGGTTGGCGAGGAAGTGAGGGAGCTTCCTTGCAAGCACGTGTACCACTCCGATTGCATTGTTCCGTGGCTTAGGCTTCATAACTCTTGCCCTGTTTGTCGCCTCGAGGTGCCAGTTTCTGAGGAAGAGGACTATGGGTGCATTGAAGAAGGTGAAGTTGGTGGTGGTGGTAGGTTTCGGAGGTGCTTGAGGTGGACGTCACGTGGAATCGCTTCTCTGTGGCCTTTCCATGGAAGGTATCATCGACGTGTTCATCACGCTGAAGATCGAGCAGGGAATAATAACGTTGCTGCTTCTGCATCTTCTTCTTCTTCTTCTTCATCTTCAAGGGGTGATTGTTAA 996 0.5783 MGNNNNNHHHPGGSSCTGASSATAWHASQPITPRRSRAHAASANSSSKSTSQRQGSSLTSPTTTLRLKPVCSKHFPSCSIPPSAAPPPNPTAAAVPTPTTPQHSKSSSPARHRPRPQGSEPEPARPRTWIILQPIGDPSSNPLEPIVPRREGPIPRGANPRDYYLGPGLNELIEQLTENDRPGPAPAPERAINGIPTVKIESGHLKENSQCPVCQEEFEVGEEVRELPCKHVYHSDCIVPWLRLHNSCPVCRLEVPVSEEEDYGCIEEGEVGGGGRFRRCLRWTSRGIASLWPFHGRYHRRVHHAEDRAGNNNVAASASSSSSSSSSRGDC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0963 331 MobiDBLite consensus disorder prediction 1 30 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 38 65 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 81 95 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 81 159 - -
Aev08g0963 331 CDD RING-H2_RNF126_like 210 252 - -
Aev08g0963 331 ProSiteProfiles Zinc finger RING-type profile. 211 252 IPR001841 -
Aev08g0963 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 139 296 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 1 65 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 309 331 - -
Aev08g0963 331 Pfam Ring finger domain 210 252 IPR001841 -
Aev08g0963 331 MobiDBLite consensus disorder prediction 312 331 - -
Aev08g0963 331 MobiDBLite consensus disorder prediction 96 113 - -
Aev08g0963 331 SUPERFAMILY RING/U-box 191 257 - -
Aev08g0963 331 SMART ring_2 211 251 IPR001841 -
Aev08g0963 331 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED 139 296 - -
Aev08g0963 331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 174 258 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0963 Aev-Chr8 5717018 5718013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0963 129 294 C3H Transcription Factor Family AT1G68180 36.471 2.88e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0963 K11982 - gmx:100787399 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0963 08 5717018 5718013 Aev08g0963 08 5717018 5718013 ECH