Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0941 ATGGAACGAAAAGAGGACAAACAATCTTCCCACAAAACTCCATACACTGAACTTGAGCAAGTTAACTTTGATTTTATTCTGGCAATGAGCATGCAAGAAGAACAAGATGGAGCGTCCGCGACGCAAGAAACTATCAATAGCGAAAGCGATGAAGAAATGAGTGAGTCCACCTTTGAAAGTGATGATGAAGGAGGTGAAAGCAATTATGATGAAGAAATGGAACTGGAGATGGAGATGGAGATGGAAATGGAATCGGAAGAAGAGGAAGAAGATGAGATTGATCCAGATGAATTGTCCTATGAAGAGTTGATTGAGTTAGGGGAAAGAATAGGAGAGGAACAGAGAGGATTATCAGCAAATGAAATCCCATCATGCTTACACCCTTACACTTATCATTACCAATCTTCTTCTGAAAGCAAAAGTGGAATTGGAATTGGAATTGATCGATGTGTGGTTTGCCAAGTTGAATATGAAGAAGGTGAAACCGTGGTGGCAATTCAATGTAAGCACCCTTTTCATGAAGATTGCATAACCACATGGCTTCAAATTAAGAAGGTTTGTCCAATATGTACCAATGAAGTTTCAGCTCCTAAAGTAGCTGATAAGAACGACCCTTGA 618 0.3981 MERKEDKQSSHKTPYTELEQVNFDFILAMSMQEEQDGASATQETINSESDEEMSESTFESDDEGGESNYDEEMELEMEMEMEMESEEEEEDEIDPDELSYEELIELGERIGEEQRGLSANEIPSCLHPYTYHYQSSSESKSGIGIGIDRCVVCQVEYEEGETVVAIQCKHPFHEDCITTWLQIKKVCPICTNEVSAPKVADKNDP* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0941 205 Coils Coil 69 89 - -
Aev08g0941 205 MobiDBLite consensus disorder prediction 48 69 - -
Aev08g0941 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 203 IPR013083 -
Aev08g0941 205 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 200 IPR033276 GO:0004842|GO:0016567|GO:0046621
Aev08g0941 205 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE 1 200 - -
Aev08g0941 205 SUPERFAMILY RING/U-box 149 196 - -
Aev08g0941 205 SMART ring_2 150 190 IPR001841 -
Aev08g0941 205 MobiDBLite consensus disorder prediction 27 69 - -
Aev08g0941 205 Pfam Ring finger domain 149 190 IPR001841 -
Aev08g0941 205 ProSiteProfiles Zinc finger RING-type profile. 150 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0941 Aev-Chr8 5575113 5575730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0941 90 194 C3H Transcription Factor Family AT3G63530 46.226 5.38e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0941 K19045 - gmx:100526881 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0941 08 5575113 5575730 Aev07g1696 07 17814929 17815827 PCT