Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0905 ATGGCTACCACCACCACCTCCACCTTCCTCCTCCCATCACCACCACTACTGCTCCGTCGAAACCTCCCGACCTTCACCGCCTCACTCTCCCCACGCTCCCAACCTATTACTCCTTCATTATCTTTCAATTTCAAACCCACCTTCATCCCTCTGAGGAGGAACAACCCCTTCCTCACCCGCGCCGACGACGTCGACGCCGACGGACCCGGCCCCGACGACTACGACATGGACGAGGACGAGCTCGAGGAGGTCGACAACAAGAAGGACTTCGACATTGAGTACGAGCCCCTCGCAGCTGCCGGTGCTGCTGCGGCGGATTCCGGCGACATCGCGATGGTGCAGAGCAAGAGCTTCGTGTCGACGCAAGGGTGGGATTCGGAGACGGTAGTGGATTACAGGATAAACGAGGATGAGTTCCACAAGTTATGCTTGGCTGATTGCGACTTCTTCATAAGGAAGCCACCTGATCCTGACAACAATGTATTTGATTTCAGGGAGATGTATGTGACTCCTCCAGATACAGATGTTTATTCTATCCCCAAGGTGCTTGCTCCAATGCCTCAGAAGTACATCAGATGTGCATTTAGTGACTATGGATGCTACAACGTGACAGAGCCACCCATTGATGCACCTCGAGACCCTTTATATAAAACTGAGAGGGAGATTTATAAGGTGTACTTGACAAAACACTACAAAAACCGAAGGCAGGGTGACCCAGAGTTTGTGCTTGATTTCGAGGAGATTTATATTATTGATTCAAAAACTAAGTCAATAACCAGAGCAAAAGTTGTGGTAACTGCTCCTGGAGGGAGAAATAGAGATAGAAAGAACGATCTGCTCGTTATAGCTGATCGCGGAAACTCCTTCAAAGTAATACATTCTAGCGAAAAAGATGATCCAACAACTGTCATAGAAAGGGAAGAGTGGAACAAGTCCAGGCAAGACATGGAGAAGCATCTTACCCTTGCCAATCTAATCTATCAGATCAGATCAGATAGATATAATGAAGCTTTCAAGATGGTGAATGAAATTGTTGTTGCATGCAAAAAGGAAGAGGGAACATACCCTTTAACCTTAGGCCATACCGTGGAGGCCAGAGTGCTACCTCCTCTTTATCTTTTCCACTACTACAACAATTCTCCATTTCATAAATATAACAAAGAGAAGAAAAAGAGAGATCGAGCGAGAAGAAAAAAGAAGAAGCAGAAGATGGGAAGAGGAAAGATAGAGATAAAGAGGATAGAGAACTCAAGCAACAGGCAAGTGACCTATTCAAAGAGGAAGAATGGGATCCTAAAGAAAGCAAAGGAAATTAGTGTTCTGTGTGATGCTCAAGTTTCCCTTATCATCTTTGGTGCTTCTGGCAAGATGCATGAATACATCAGCCCCTCCACCACGTTGATTGATATACTGGACAGATACCAAAGAGCATCTGGAAAGACTCTATGGGATGCTAAGCATGAGAATCTCAGCAGTGAAATTGATAGGGTCAAGAAAGAGAATGACAACATGCAAATTGAACTCAGGCACTTGAAGGGGGAAGACATTACCTCACTGAATTACAAGGAGCTGATGGCACTAGAGGAATCCCTTGAAAAGGGTCTCAATGGAATCCGTGACAAAAAGAATGAAGTTCACAGGATGTTCAAGAGAAACGGTAAGATTTTGGAGGAGGAAAATAGGGAACTCAATTTCCTTCTGCAACAGCATTTGGCACTGGAAGGGGCAAGAAACATGCACGGACAGTGGATTTGA 1755 0.4564 MATTTTSTFLLPSPPLLLRRNLPTFTASLSPRSQPITPSLSFNFKPTFIPLRRNNPFLTRADDVDADGPGPDDYDMDEDELEEVDNKKDFDIEYEPLAAAGAAAADSGDIAMVQSKSFVSTQGWDSETVVDYRINEDEFHKLCLADCDFFIRKPPDPDNNVFDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAFSDYGCYNVTEPPIDAPRDPLYKTEREIYKVYLTKHYKNRRQGDPEFVLDFEEIYIIDSKTKSITRAKVVVTAPGGRNRDRKNDLLVIADRGNSFKVIHSSEKDDPTTVIEREEWNKSRQDMEKHLTLANLIYQIRSDRYNEAFKMVNEIVVACKKEEGTYPLTLGHTVEARVLPPLYLFHYYNNSPFHKYNKEKKKRDRARRKKKKQKMGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSSEIDRVKKENDNMQIELRHLKGEDITSLNYKELMALEESLEKGLNGIRDKKNEVHRMFKRNGKILEEENRELNFLLQQHLALEGARNMHGQWI* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0905 584 Coils Coil 556 576 - -
Aev08g0905 584 Coils Coil 487 514 - -
Aev08g0905 584 ProSitePatterns MADS-box domain signature. 406 460 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 SMART madsneu2 404 463 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 ProSiteProfiles K-box domain profile. 487 573 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev08g0905 584 Gene3D - 416 501 IPR036879 GO:0003677|GO:0046983
Aev08g0905 584 SUPERFAMILY SRF-like 405 498 IPR036879 GO:0003677|GO:0046983
Aev08g0905 584 CDD MADS_MEF2_like 409 483 IPR033896 GO:0000977|GO:0045944
Aev08g0905 584 Pfam K-box region 485 564 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev08g0905 584 ProSiteProfiles MADS-box domain profile. 404 464 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 PANTHER EXPRESSED PROTEIN 31 323 IPR044710 GO:0000427
Aev08g0905 584 PRINTS MADS domain signature 406 426 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 PRINTS MADS domain signature 426 441 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 PRINTS MADS domain signature 441 462 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 413 460 IPR002100 GO:0003677|GO:0046983
Aev08g0905 584 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0905 Aev-Chr8 5345574 5353111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0905 404 546 MADS-box Gene Family AT5G20240 67.133 7.02e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev08g0905 K-box 3.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0905 - - vvi:100250482 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0905 08 5345574 5353111 Aev08g0905 08 5345574 5353111 ECH