Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0870 ATGGAGGATTGCTCTGGTGGTGAGGACACCAAGAGCTGTCCCCGCGGTCACTGGAGACCCGCTGAAGATGAGAAGCTCCGTCAACTTGTTGAACAATACGGTGCTCAGAACTGGAATTCTATTGCGGAAAAGCTGCAAGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTAGACCCTCGAATAAACAGAAGGCCATTCACGGAAGAGGAAGAAGAGAGGCTGCTGGCAGCACACCGCATTCACGGCAACAAGTGGGCCCTCATAGCCAGGCTTTTTCCCGGCCGAACCGACAACGCTGTGAAGAACCACTGGCATGTTATTATGGCCAGGAAGCAGAGGGAGCACTCTAAGTTATGCGGTGGTGGCAAGAGAACCAGCTTCCAACAATTATTCTACAACAACAACAACAAGGATAACGCTACTACTTCCTCTTCCTCCAACCATCATAAGAGACCACGATCCTCCTCTCATCATCAACAGCAACTCCTATTCGCCTCATCATCAACATTCTTTGACTTTCGGAGCCTTGACCACAAACACTCCCCTAGTTCTTGTTTGAGAAGCTCCTCTTTCTCTAATATTTATGTTCCGGAATGTTCCAAGACTAGCTCATCATCAGATAATAGGTTTCTATGCAGAGTTTATCCCACTCATCATCCTCCTCCAGCACACTTTCCCAACAACAACAACGCCTTCTCCATCCCAAACTACACTCAGTATCCTTTAGTGTTCCTGGGTTCCTCTGATTATGATGGAAGGATAGTAAAGAGGGACGCTTCTACCACATTCACAAAGTTGAAGGCTTCACCCGAGAACAACAACAAGAATGATGATGATGATGAGCACAAACAAGTTCCTTTCATTGATTTTCTTGGTGTTGGTGTCTCTTCATCATAA 909 0.4642 MEDCSGGEDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREHSKLCGGGKRTSFQQLFYNNNNKDNATTSSSSNHHKRPRSSSHHQQQLLFASSSTFFDFRSLDHKHSPSSCLRSSSFSNIYVPECSKTSSSSDNRFLCRVYPTHHPPPAHFPNNNNAFSIPNYTQYPLVFLGSSDYDGRIVKRDASTTFTKLKASPENNNKNDDDDEHKQVPFIDFLGVGVSSS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0870 302 ProSiteProfiles Myb-like domain profile. 15 61 IPR001005 -
Aev08g0870 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev08g0870 302 Gene3D - 15 66 - -
Aev08g0870 302 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev08g0870 302 PANTHER MYB PROTEIN-RELATED 7 300 - -
Aev08g0870 302 MobiDBLite consensus disorder prediction 138 153 - -
Aev08g0870 302 MobiDBLite consensus disorder prediction 138 163 - -
Aev08g0870 302 Pfam Myb-like DNA-binding domain 18 78 - -
Aev08g0870 302 Gene3D - 69 165 - -
Aev08g0870 302 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Aev08g0870 302 PANTHER TRANSCRIPTION FACTOR MYB56 7 300 - -
Aev08g0870 302 CDD SANT 18 59 IPR001005 -
Aev08g0870 302 SMART sant 14 63 IPR001005 -
Aev08g0870 302 SMART sant 66 114 IPR001005 -
Aev08g0870 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 61 IPR017930 -
Aev08g0870 302 CDD SANT 78 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0870 Aev-Chr8 5131922 5132944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0870 13 122 MYB Transcription Factor Family AT1G17950 84.545 3.55e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g0870 Myb_DNA-bind_6 2.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0870 K09422 - gmx:100817328 329.331