Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0837 ATGACCAACACCATCATGGAACAGAGCATCCTATGCAAATACACAGTCCACCACACTGTCACCAACAAATTCACCAAACCTTCCTCAACCAAGAAGCCCTCCGCAGAGCCCAGAACAGTGCGCGTATCCTTCACCGATCCAGACGCCACTGACTCCTCCAGCGACGACGAAGGAGAAAGCTACCCTTCTCGCAAGAGAGTCAAGCGATACGTGAACCGCATTCAAATCGAAACCGCCACTACCAGAAATGGCGTTTCCTCAAGGAAGAGGCCCGCCGGCGACCCTGCTCCCTGCCGGCGACCGGTGAAAGCTCCGGCAATCACTACCAACAACGGCGCAAAGAAGTTCCGCGGCGTGAGGCAGAGGCCATGGGGGAAATGGGCGGCGGAGATTCGAGACCCGGCGAGAAGGGTAAGACTCTGGTTGGGAACCTACGAAACCGCTGAAGAAGCTGCCATGGTTTACGACAATGCCGCGATTCAGATTCGCGGACCCAACGCCCTCACTAACTTTATCACTCCGCCGCAGAGGGAAGAAGAGAAGCAACAACAACCACCGCAGGAGGAAGAGCCAGAAAGTGGCGTGAAGCCAGAAATGAAGGTGGTTGTGAAGACAGAAGCTTCGGGTTCGTATTACGACTCGGGCGACGATCGGTGTGTGAACCTGTCTTCTCCGACTTCAGTTCTGACATACAGAAGCAGCGAAACGGAAGAGAGTAAGAAAGCGGTGGAAGCGGAAGAAGTGAGTGAGGTGTCAGTTTCAGTAATGGGGGAAGTGTTCGGAGAGTGTCAAGGGGAGACGAGTCTGTTCAACGAGACCGATGAGTTTTTGGGGCTTGACAGCATTATGCCTGTTTGGGACGACGTCTTCGATTTTCAGACGCCGCAGTACCCTGTTTTGTTCGACGACGAGCCGCCGCAGCAGATGTTGGGGGAAACGACGCCGTTTTCATCATCAGACGAGGATTTCAGTGACAACAGCATCGACCTCGCTGATTCCCTCTTCGATTTCGATAAGGCTTGCTCTCCATCTACCTCCTGCCAAGTGGACGATTACTTCCAAGACATTTTATTGGCCTCTGATCCTTTAGTTGCTCTATGA 1101 0.5341 MTNTIMEQSILCKYTVHHTVTNKFTKPSSTKKPSAEPRTVRVSFTDPDATDSSSDDEGESYPSRKRVKRYVNRIQIETATTRNGVSSRKRPAGDPAPCRRPVKAPAITTNNGAKKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYETAEEAAMVYDNAAIQIRGPNALTNFITPPQREEEKQQQPPQEEEPESGVKPEMKVVVKTEASGSYYDSGDDRCVNLSSPTSVLTYRSSETEESKKAVEAEEVSEVSVSVMGEVFGECQGETSLFNETDEFLGLDSIMPVWDDVFDFQTPQYPVLFDDEPPQQMLGETTPFSSSDEDFSDNSIDLADSLFDFDKACSPSTSCQVDDYFQDILLASDPLVAL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0837 366 MobiDBLite consensus disorder prediction 24 104 - -
Aev08g0837 366 SUPERFAMILY DNA-binding domain 115 171 IPR016177 GO:0003677
Aev08g0837 366 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 MobiDBLite consensus disorder prediction 57 72 - -
Aev08g0837 366 PRINTS Ethylene responsive element binding protein signature 116 127 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 PRINTS Ethylene responsive element binding protein signature 138 154 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 MobiDBLite consensus disorder prediction 176 198 - -
Aev08g0837 366 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 10 359 - -
Aev08g0837 366 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 359 - -
Aev08g0837 366 SMART rav1_2 115 178 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 CDD AP2 114 171 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 MobiDBLite consensus disorder prediction 181 198 - -
Aev08g0837 366 ProSiteProfiles AP2/ERF domain profile. 115 172 IPR001471 GO:0003700|GO:0006355
Aev08g0837 366 Gene3D AP2/ERF domain 114 173 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0837 Aev-Chr8 4914200 4915300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0837 12 238 AP2-EREBP Transcription Factor Family AT4G27950 48.729 7.12e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev08g0837 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0837 - - adu:107460630 397.127