Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0833 ATGGATGATAGCTTATCTGATATCTTTGAGGACAGAGAGTTCGGAGGAGACGACCTCTTTGCCATTTTGGAAGGCCTCGAAGACTTCACCCCAACAGAAGATCATTTCCCTCTCACTAACGATGCTGCTGTGATCAGCACTAGTAATTGTTGGAAAGAGAAGGGGGAAGCAGCATCGAGATTGGTGTCCCAGAAGTCAACCTCCTCTTGCACTGCTCCACCACCGCAGGCGGATTCATCAGAGACAGAGCTTGAAATTTATGAAGCTGCTCTCTCATCACCAAAAAGCAAGAGACGGAAGGTGGCAATTTCTTCTTCTTCTTCTTCAGCGGATCAGCTGCAGGAGGACCAGCAAGATAATAATGGACAGCAAAGGATGTCTCATATCACGGTGGAGCGCAACCGAAGGAAGCAGATGAATGAGCATTTGTCCGTCTTGAGGTCACTCATGCCTTGCTTCTATGTCAAGAGAGGAGATCAAGCATCGATAATTGGAGGAGTGGTAGATTACATCAACGAGCTGCAGCAGGTGCTGCAAGCCCTGGAGGCGAAGAAACAGAGGAAAGTAGCTTACAGCGATGTACTCAGCCCTAGGGTAGGGGTAGCAGCAGTTTCAAGCCCGAGGCCCTCGCCGCTGAGCCCGCGAAAGCCCCCGTTGAGCCCTAGGCTAAACTTGCCCATTAGCCCCAGGACTCCACAACCGGGTAGCCCATACAGGCCGAGGTTGCAGCAGCAGATAACAGCAGGCAACAACACGAACTCATCCCCTCATCATCATCATTATCAGGCAGTAGTAGTGGACCCATCTCCTACCACAACAACATCTAGTTCATCGCCTTCCTCCATCAACGAGCTGGTAGCGAATTCCAAGTCCCCAGTTGCTGACGTGGAGGTCAAGTTCTCGGGGCCGCACGTTCTATTGAAGACAGTATCGCAGCGAATTCCGGGGCAGGCTCTGAAGATCATATCGGCACTAGAAGACCTTGCCCTTGAAATCATCCATCTCAACATTACTACTACTGCCGATGAAACCATGCTTAACTCATTCACTATCAAGATTGGAATTGAATGCCAACTGAGTGCGGACGAGCTTGCTCAACAAATCCTGCAAACATTCTGCTAA 1122 0.5009 MDDSLSDIFEDREFGGDDLFAILEGLEDFTPTEDHFPLTNDAAVISTSNCWKEKGEAASRLVSQKSTSSCTAPPPQADSSETELEIYEAALSSPKSKRRKVAISSSSSSADQLQEDQQDNNGQQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQALEAKKQRKVAYSDVLSPRVGVAAVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLQQQITAGNNTNSSPHHHHYQAVVVDPSPTTTTSSSSPSSINELVANSKSPVADVEVKFSGPHVLLKTVSQRIPGQALKIISALEDLALEIIHLNITTTADETMLNSFTIKIGIECQLSADELAQQILQTFC* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0833 373 Gene3D - 113 199 IPR036638 GO:0046983
Aev08g0833 373 MobiDBLite consensus disorder prediction 210 236 - -
Aev08g0833 373 MobiDBLite consensus disorder prediction 98 128 - -
Aev08g0833 373 MobiDBLite consensus disorder prediction 201 241 - -
Aev08g0833 373 CDD bHLH_AtFAMA_like 126 199 - -
Aev08g0833 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 197 IPR036638 GO:0046983
Aev08g0833 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 174 IPR011598 GO:0046983
Aev08g0833 373 SMART finulus 129 180 IPR011598 GO:0046983
Aev08g0833 373 MobiDBLite consensus disorder prediction 62 78 - -
Aev08g0833 373 MobiDBLite consensus disorder prediction 98 136 - -
Aev08g0833 373 PANTHER TRANSCRIPTION FACTOR SPEECHLESS 1 373 - -
Aev08g0833 373 PANTHER TRANSCRIPTION FACTOR FAMA 1 373 IPR044283 GO:0003700|GO:0010052
Aev08g0833 373 Pfam Helix-loop-helix DNA-binding domain 124 175 IPR011598 GO:0046983
Aev08g0833 373 Coils Coil 167 191 - -
Aev08g0833 373 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0833 Aev-Chr8 4872983 4875065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0833 1 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 48.158 7.50e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g0833 HLH 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0833 K20558 - gmx:100777437 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0833 08 4872983 4875065 Aev08g0833 08 4872983 4875065 ECH