Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0832 ATGGATCAGAAGGTGGGAGGAGATGCAAAGAAGATCATAGAGGAGTTAGTACAAGGGTTGGAGTTGGCAAGAGAGCTCCAAATGCAGCTGCACGTGGCGTCAACATCGCATGAAACCCGTGAGCTTCTGATCCAGAGGATCATATCTGCGTTCGAAAAGGCACTCGAGATGGTGAGCTGGAAAGGGAAAGGGGGCCCAATAATGCCATCGTCACTACTAGCAGTGGGATCAGAGCCATCGTCGTCACATCATCATCATCATCATCATCTCATCTCATCACCTCTCGTTGGGATCAGAATGTCAGATGAGTCGCCACCTTTGAGCGCCAGTCCCCGCAGCGAAGACTCTGACAGAGATTTCGCCAGATCAGACCTACAACAAGATCAAACTCCTTCCAGAAAAAGAAAGACTTTGCCAAGATGGACAAAACAGGTTCGAGTCAACCCAGGAATGGGGGTGGAAGGGCCTCTTGATGATGGATACAGTTGGAGAAAATATGGTCAGAAAGACATTCTCGGAGCTATGTATCCAAGGGGTTACTATAGATGCACGCACAGAAATGTGCAGGGGTGCTTGGCCACAAAGCAAGTGCAAAGATCTGATGAAGACCCGACTGTGTTCGAAATCACATACAGAGGAAAACACACGTGCACAGTAGTGGCATCCTCATCCAATGCAGTCCCTAATTCTGCAACAACAAGTCCAACAGAAAATAATCAAGAGTCCAACAGCTTCAACGCAACAATCCCGCACAATAATAATAATAACAATGTGCTGCAAAGCCTGGACCAGCAACCCATCAATGAGCTGCTTCTGAACCTGCGTGAAGGCCTGAGGGTCCAAACAGAGAACCTTGATGCCCCACCTGATCCTCACCACCAACACTTTGCAACTTCATTGTACCCTTCAAACATCAAAACAGAGAGCCAGGTTTTCCCACCACCGCCGCATCCTATGCTTGCTGAAAACAACAACTTCAATAATTCTCCTTCCTATGTGTCCCCAGCCACCTCATCAGGAATAAGCCACTTTTCGGTGTCTCCATCAGGAATCATGCCCAATTTGGCAACTTCTGGTGGGTCACAGATCAAGGACATCATCTCTGCTTCAAACTCACCAACCGTTCCTCTAGATTTCCCTTTTGACCACTTTGAATTTGATGGCCACCACTTCACTTTTGATAACCCACGATTTTTCTCCTAA 1203 0.4746 MDQKVGGDAKKIIEELVQGLELARELQMQLHVASTSHETRELLIQRIISAFEKALEMVSWKGKGGPIMPSSLLAVGSEPSSSHHHHHHHLISSPLVGIRMSDESPPLSASPRSEDSDRDFARSDLQQDQTPSRKRKTLPRWTKQVRVNPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCLATKQVQRSDEDPTVFEITYRGKHTCTVVASSSNAVPNSATTSPTENNQESNSFNATIPHNNNNNNVLQSLDQQPINELLLNLREGLRVQTENLDAPPDPHHQHFATSLYPSNIKTESQVFPPPPHPMLAENNNFNNSPSYVSPATSSGISHFSVSPSGIMPNLATSGGSQIKDIISASNSPTVPLDFPFDHFEFDGHHFTFDNPRFFS* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0832 400 Pfam WRKY DNA -binding domain 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g0832 400 Gene3D WRKY domain 150 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g0832 400 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 398 IPR044810 GO:0003700
Aev08g0832 400 MobiDBLite consensus disorder prediction 98 140 - -
Aev08g0832 400 ProSiteProfiles WRKY domain profile. 152 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g0832 400 MobiDBLite consensus disorder prediction 225 254 - -
Aev08g0832 400 SUPERFAMILY WRKY DNA-binding domain 156 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g0832 400 MobiDBLite consensus disorder prediction 112 135 - -
Aev08g0832 400 SMART WRKY_cls 157 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g0832 400 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 7 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0832 Aev-Chr8 4869731 4871214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0832 8 290 WRKY Transcription Factor Family AT4G23810 34.983 3.32e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev08g0832 WRKY 8.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0832 - - gmx:100776906 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g0193 02 1452325 1454975 Aev08g0832 08 4869731 4871214 ECH
Aev03g3138 03 29948307 29949570 Aev08g0832 08 4869731 4871214 ECH
Aev08g0832 08 4869731 4871214 Aev08g0832 08 4869731 4871214 ECH