Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0812 ATGATCATCAAGCGGAACTTGAAATCCCAAATGCCGAGTCTGAAACGGTGCAGAATCAGCGACCCGGTTGGTAAAATCGACGAGTGCTCCGTGACTCGGAAGAAGAGGAAGACCAGCACCAGCGGCTACTACCCTCTCAACCTACTTGGCGACGTTGCCGCGGGAGTGATTCCGGTGAGCCTCCACGGCCTGCTCAGCGTCGCCGGTGCCTCCGAGAAGGGATTCTCTGCTTCGTGGTGCACCGAAGTCCCCTGCTCCCCCGGAGAAGTTGAATCCCAGAAAGAAGGTGGCGACGTTCGCGGCGGAAACGATGTTGTTCGGGTGAGAAAAAACCGTTCCGGTGAGGTTCAGCGGCCGCCGCTGGTTCGGACGTCAAGGGGGCGGGTTCAGGTGCTTCCTTCTCGGTTCAACGATTCTGTTATTGATAATTGGAGGAAAGAGAGTAAGAACATTTTGCCTGATGATGAACTTGATGAAGAATTTGATTGTAAGAATGAGAGGTTCAGCTTCAAGGCACAGAAGAATTGTAATCAGAATGGAAAGAAAGGGAGGAACAATGAGAGAAACGGTTACAAGGGCCGTAGCAAGTATTTGGCATTGTGTGGTGATGGTTTTGATGTGAAGGCTAAGCATTCAATGCGTGAGGTTTTGGTTGAGGATGAGAGGGGAAGGTTTGTGGAGGTTGAAGGTGTTGAGTTAATGGGGAGTGAGAGGAAGGAGGGGCTTTATGGTCCAGAAGATTTTTATGCTGGTGATATTGTGTGGGCCAAAGCAGGGAAGAAGGAACCTTTTTGGCCAGCCATTGTTCTTGATCCTATGAATCAGGCACCTGAGCTGGTCCTCAGGTCTTGCATTGCTGATGCTGCTTGTGTCATGTTTCTTGGATATGCCGAGAATGGGAGTCAAAGGGTGTGTGACTATGCATGGGTTAAGCATGGCATGATTTTTCCATTTATGGATTATGTGGACAGGTTTCAGGGGCAACCTGAATTGAGCTCCTATAATCCCTCTGGTTTGGAAATGGCCATAGAGGAGGCATTTTTGGCAGACCAGGGCTACAATGAGAAGTTGATGGCAGAGATAAATGCAGCAGCCGGTAACACTAGTTTTGATGATACTATTCTTAAAGCCCTAACTGGTTCAAACAAGTATGCAGGATATCACTATCTGAATAAGGATTTATTTGATAAGAAACACACAAGACCCTGTGAAGCCTGTGGATTGCGCCTTCCTTTCAAGTTGCCAAAGAAAACAAAGGGTTCGGCTACTGATGGCAAATTCCTATGTAAAACATGTGCCAGGTTAACCAAATCAAATCATTATTGTGGCATATGCAAGAAAGTTTGGAATCATTCAGACAGTGGAAGTTGGGTACGTTGCGATGGATGCAAAGTGTGGGTGCATGCAGAATGCGACAAAATTTCTCGAAACCATTTTAAGAATCTTGAAGGCACTGATTATTACTGCCCTACTTGCAAAGCCAAGTTTAATTTTGAGTTATCTGATCCAGAAAAATCACGGCCAAAAGTCAAGTCGAATAAAAATGGTGGAAAGCTAGCGCTTCCAAATAAAGTCACTGTTATCTGCAATGGTGTGGAAGGCATATATTTTCCGAGCCTTCATTCAGTTGTGTGCAAGTGTGGTTTTTGTGGGAATGAAAAGCAAGCACTTAGTGACTGGGAACGACACACGGGTTCCAAATTAAGAAATTGGAGAACAAGTGTTAGGGTCAAAGACTCCAAGCTACCCCTGGAACAATGGATGCTGCAGTTGGCAGAAGTCCATGATAATGCTACAGTTTCTGCCAAACCTAAAAAACCTTCTCTAAAAGAAAGGAAGCAGAGGTTACTTGCCTTCTTGGAAGAGGGGTATGAACCTGTTTACGCCAAGTGGACAACAGAACGATGTGCTGTATGTAGATGGGTTGAAGACTGGGACTACAACAAAATTATTATTTGCAACAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAATGTTCGAGACTTTACATCTTGGGTTTGTAAGGCTTGTGAGACACCTGACATCAAGCGGGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACAGATATCGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCCAGTGATGAGAAGATGGAGCCTGCTTTGGGTATTCTCAGTATTCCTTCAAATTCTTTTGTAAAGATTTGTGTTATTTGCAAGCAATTCCATGGTTCATGTACACAATGTTGCAAGTGTTCCACTTATTTCCATGCCATGTGTGCATCAAGGGCTGGTTATCGGATGGAGTTGCATATTTCTGAGAAAAATGGCAAGCAGACAACAAGAATGGTCTCTTTTTGTGCTTACCACAGGGCCCCCAATCCTGATACTGTTTTGATTATGCAAACCCCTCTTGGGGTCATTTCAACCAAAAACCTTCTCCAAAGTAAGAAGAAAACTGGATCAAGGTTAATTGCATCTAACAGAATAAAGCAAGAAGAAGACACTCCTGTAGATAATGCAGAGCATGAGCCATTATCTGCTGCTAGGTGCCGAATCTTTCAAAGGACAAATCATAGCAAAAAGAGAGCAACAGAGGAAGCCGTTTCTCTCAGAGTTGGGGGACATTGTCATCATGCTTTAGATGCAATACAGAATCTAAATAAATTCAGAGCAGTAGAGGAACCTCCGACATTTTCTTCTTTCAGAGATCGGCTTCACCACTTGCAGAAAACCGAAAATGAACGAGTTTGCTTTGGTCGATCGGGCATCCATGGATGGGGCCTGTTCGCACGTAGAAACATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGCGAACAAGTGAGAGGCAGCATTGCGGATCTGAGGGAGGCGCGCTATAGATTAGAAGGCAAAGACTGCTATCTATTTAAGATTAGTGAAGAAGTGGTGGTAGATGCCACTGATAAAGGGAACATAGCACGACTTATTAATCATTCTTGCATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGTGATGACGAGAGCCGGATCGTACTCATCGCTAAGACTAACGTATCTTCCGGCGACGAGTTAACGTATGACTACTTGTTTGATCCTGATGAACCAGATGAATTCAAGGTGCCATGTCTATGTAAAGCTCCAAATTGTAGGAAATTCATGAATTAG 3207 0.4453 MIIKRNLKSQMPSLKRCRISDPVGKIDECSVTRKKRKTSTSGYYPLNLLGDVAAGVIPVSLHGLLSVAGASEKGFSASWCTEVPCSPGEVESQKEGGDVRGGNDVVRVRKNRSGEVQRPPLVRTSRGRVQVLPSRFNDSVIDNWRKESKNILPDDELDEEFDCKNERFSFKAQKNCNQNGKKGRNNERNGYKGRSKYLALCGDGFDVKAKHSMREVLVEDERGRFVEVEGVELMGSERKEGLYGPEDFYAGDIVWAKAGKKEPFWPAIVLDPMNQAPELVLRSCIADAACVMFLGYAENGSQRVCDYAWVKHGMIFPFMDYVDRFQGQPELSSYNPSGLEMAIEEAFLADQGYNEKLMAEINAAAGNTSFDDTILKALTGSNKYAGYHYLNKDLFDKKHTRPCEACGLRLPFKLPKKTKGSATDGKFLCKTCARLTKSNHYCGICKKVWNHSDSGSWVRCDGCKVWVHAECDKISRNHFKNLEGTDYYCPTCKAKFNFELSDPEKSRPKVKSNKNGGKLALPNKVTVICNGVEGIYFPSLHSVVCKCGFCGNEKQALSDWERHTGSKLRNWRTSVRVKDSKLPLEQWMLQLAEVHDNATVSAKPKKPSLKERKQRLLAFLEEGYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPDIKRECCLCPVKGGALKPTDIDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQFHGSCTQCCKCSTYFHAMCASRAGYRMELHISEKNGKQTTRMVSFCAYHRAPNPDTVLIMQTPLGVISTKNLLQSKKKTGSRLIASNRIKQEEDTPVDNAEHEPLSAARCRIFQRTNHSKKRATEEAVSLRVGGHCHHALDAIQNLNKFRAVEEPPTFSSFRDRLHHLQKTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVSSGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0812 1068 Gene3D - 245 354 - -
Aev08g0812 1068 SUPERFAMILY FYVE/PHD zinc finger 634 698 IPR011011 -
Aev08g0812 1068 Pfam PWWP domain 251 346 IPR000313 -
Aev08g0812 1068 Pfam PHD-finger 441 494 IPR019787 -
Aev08g0812 1068 CDD SET_SETD1-like 913 1064 - -
Aev08g0812 1068 CDD ePHD_ATX3_4_5_like 690 801 IPR041955 -
Aev08g0812 1068 ProSiteProfiles PWWP domain profile. 250 321 IPR000313 -
Aev08g0812 1068 SUPERFAMILY SET domain 919 1065 IPR046341 -
Aev08g0812 1068 SMART PHD_3 441 493 IPR001965 -
Aev08g0812 1068 SMART PHD_3 746 802 IPR001965 -
Aev08g0812 1068 SMART PHD_3 635 682 IPR001965 -
Aev08g0812 1068 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 629 684 IPR013083 -
Aev08g0812 1068 ProSiteProfiles Zinc finger PHD-type profile. 439 495 IPR019787 -
Aev08g0812 1068 ProSiteProfiles Post-SET domain profile. 1052 1068 IPR003616 -
Aev08g0812 1068 Pfam PHD-zinc-finger like domain 689 801 - -
Aev08g0812 1068 ProSitePatterns Zinc finger PHD-type signature. 636 681 IPR019786 -
Aev08g0812 1068 Gene3D SET domain 819 1068 IPR046341 -
Aev08g0812 1068 ProSiteProfiles Extended PHD (ePHD) domain profile. 687 802 IPR034732 -
Aev08g0812 1068 ProSiteProfiles Zinc finger PHD-type profile. 633 684 IPR019787 -
Aev08g0812 1068 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1068 IPR025780 -
Aev08g0812 1068 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX4 1 1068 - -
Aev08g0812 1068 ProSiteProfiles SET domain profile. 926 1043 IPR001214 GO:0005515
Aev08g0812 1068 SUPERFAMILY Tudor/PWWP/MBT 243 349 - -
Aev08g0812 1068 CDD PHD_TCF19_like 442 492 - -
Aev08g0812 1068 CDD PHD_ATX3_4_5_like 635 681 IPR042011 -
Aev08g0812 1068 SUPERFAMILY FYVE/PHD zinc finger 438 498 IPR011011 -
Aev08g0812 1068 SMART set_7 926 1049 IPR001214 GO:0005515
Aev08g0812 1068 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 685 804 IPR013083 -
Aev08g0812 1068 SMART PostSET_3 1052 1068 IPR003616 -
Aev08g0812 1068 Pfam PHD-finger 648 682 - -
Aev08g0812 1068 Pfam SET domain 937 1042 IPR001214 GO:0005515
Aev08g0812 1068 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 436 496 IPR013083 -
Aev08g0812 1068 PANTHER PHD FINGER PROTEINS 1 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0812 Aev-Chr8 4714898 4721961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0812 636 801 C2H2 Transcription Factor Family AT3G14740 34.483 4.25e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev08g0812 zf-HC5HC2H_2 4.1e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0812 - - aprc:113853254 1783.46