Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0807 ATGAAGAACACTCCAATACTCATCCTCTCCTTCCTCTTCCTCTTCACCCCTCCACAAAAACACCTTGTAGCATCAACCACAGAACCATGCTTGGACACTGTTTGCCACACGAACGGTCCAATCATCCGATTCCCCTTCCAAATCAAAGAGAAACAACCAAACTCATCATCATGTGGCTACCCTGGTTTCACAGCATCCTGCAGTGAACATAGCCAAACACTCCTCAACCTACCTAACTCAAACTCAGAAGCAGAATTCTTCACAATCAAATCAATAAACTACGCCACACAGCAATTATGGGTTAACGACCCCAACAATTGCGTCCCAAAACGCATCTTAACCCTCAACCTCACTTCCTCACCATTCGATGCCGTTTACTACCAAGAGTTCACCTTCTTCAACTGCTCCTTCAATTTGGAGTACCTCGCTTATAGGTACAGCCCCATACCCTGCCTCAGTGATTCCAACCACACCGTTTTCGCCACCTCATCGTCCAGTGCCTATGCTTACTTGTCCTCTGTTTGCAACGCTGTTAAGACCGTTAAGGTGCCGGTTGAGTTGCCGCTGTCTGAACATGTTGTCTCCTCTGACCTCAGCGGCGACCTGAGGTTGTCGTGGGATTCGCCGTCGTGTGGGAAGTGTGAGTCGCACGGTGGAAGGTGTGGCTTCGAGACCAATACAAGTTTGCAAGTTGCATGTTCCAATAACGATCTTCCATCAAAAGGTATATCTCGAGGTGCACGTTACGCCATAGCTATATGCATAGGAGTTCCAGCGGTATTATGCTTCATTGGGATCCTGAGTTGCTTCTGCAGCAGGTTCAAAATCCTTACCCACGGTTGGGCTTGGGACCGTCACACCGTACCCGATTTCGAGCCCCTCATTAACCCACAACGTACCACCAATTTGGGCCTCGACGGGCCCACAATCGAATCCTACCCTAAAATAGTGATAAGCGATAACAGAATCTTACCCAAGCCCAATGATACGACGTGCCCAATATGCTTATCAGAGTACAGGCCCAAAGAGACAGTGAAAAGCATACCTGAATGTAGACATTGCTTTCACGCACAGTGCATTGATGAATGGCTTCCATTGAATGCGTCCTGTCCAATTTGCCGAACTTCTCCTCGGAAATTACCCGCAGCAGCTTGA 1155 0.4831 MKNTPILILSFLFLFTPPQKHLVASTTEPCLDTVCHTNGPIIRFPFQIKEKQPNSSSCGYPGFTASCSEHSQTLLNLPNSNSEAEFFTIKSINYATQQLWVNDPNNCVPKRILTLNLTSSPFDAVYYQEFTFFNCSFNLEYLAYRYSPIPCLSDSNHTVFATSSSSAYAYLSSVCNAVKTVKVPVELPLSEHVVSSDLSGDLRLSWDSPSCGKCESHGGRCGFETNTSLQVACSNNDLPSKGISRGARYAIAICIGVPAVLCFIGILSCFCSRFKILTHGWAWDRHTVPDFEPLINPQRTTNLGLDGPTIESYPKIVISDNRILPKPNDTTCPICLSEYRPKETVKSIPECRHCFHAQCIDEWLPLNASCPICRTSPRKLPAAA* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0807 384 ProSiteProfiles Zinc finger RING-type profile. 332 374 IPR001841 -
Aev08g0807 384 Pfam Wall-associated receptor kinase C-terminal 163 237 IPR032872 -
Aev08g0807 384 Pfam Ring finger domain 331 374 IPR001841 -
Aev08g0807 384 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 382 - -
Aev08g0807 384 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 382 - -
Aev08g0807 384 Pfam Wall-associated receptor kinase galacturonan-binding 30 103 IPR025287 GO:0030247
Aev08g0807 384 SMART ring_2 332 373 IPR001841 -
Aev08g0807 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 295 378 IPR013083 -
Aev08g0807 384 SUPERFAMILY RING/U-box 326 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0807 Aev-Chr8 4667533 4669435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0807 24 377 C3H Transcription Factor Family AT2G46495 37.430 2.03e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0807 - - adu:107460528 565.459