Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0788 ATGGACTTCGTCAACGATTTCCCCACCATTGACGACGACATCTTTGTTTCTCATGGAATCAACTGGTTCTCCTTTCCTCAACAACAAACCTATCACGAAATCATGGGCATTTCGCTGTTGGAGGAAGATTTCATTGAGTTCAATTGGGCGCCAGAGTTTTCTTACTACCAAAGCAATCAACTTTGCTTCAATGCATTCCCAGAACTCGAGAACATCAGCTTCAACGACTTCGATCTTCCACCACTTGACTATGATTCTGTGGTGGACCAAAAGCCCCTCAGCATTGTTGTTCCCAAAAGCCCGCAGGGGCAATATTGCAACAGAGAGGGTTCCACTTCCACCAATGGCGTTGGCTTCGTTTCTGTGAAGATTGAGAGGAGCATGTCTTCAACAACTTGTATGGAGCAAGAGGAGAAGCAGATTCAAGAAACTGCATCAAGCATAAGGAAGCAGAGAAGGAGTAGTGCATTGGATTTCCATGAGATAAAGAAGCATTTCGGTGTTCCAATAACAGAAGCAGCCAAGGAAATGGACGTGGGGTTGACCCTGTTGAAGAGAAGGTGCAGAGAGCTCAACATCATGCGCTGGCCACACCGAAAACTCAAGAGCTTGAAGTTACTCATCGACAATGTCAAGGAGATGGGTTTGGCGAAGGAAGCTGCTATGTTGGAACAGCAGCAGAAGATGTTGGAGAAACTACCTGGGATGGAACTCACGGAAAAAGCCAAGAGGCTGAGGCAGGCTTGTTTCAAAGCCAATTACAAGAGGAGAAGAAACTTGGCAAAACTACAACCTTGA 798 0.4599 MDFVNDFPTIDDDIFVSHGINWFSFPQQQTYHEIMGISLLEEDFIEFNWAPEFSYYQSNQLCFNAFPELENISFNDFDLPPLDYDSVVDQKPLSIVVPKSPQGQYCNREGSTSTNGVGFVSVKIERSMSSTTCMEQEEKQIQETASSIRKQRRSSALDFHEIKKHFGVPITEAAKEMDVGLTLLKRRCRELNIMRWPHRKLKSLKLLIDNVKEMGLAKEAAMLEQQQKMLEKLPGMELTEKAKRLRQACFKANYKRRRNLAKLQP* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0788 265 Pfam RWP-RK domain 157 204 IPR003035 -
Aev08g0788 265 PANTHER PROTEIN RKD4 123 260 IPR044607 GO:0003700
Aev08g0788 265 Coils Coil 134 154 - -
Aev08g0788 265 ProSiteProfiles RWP-RK domain profile. 144 225 IPR003035 -
Aev08g0788 265 PANTHER PROTEIN RKD1-RELATED 123 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0788 Aev-Chr8 4556995 4558435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0788 157 261 AtRKD Transcription Factor Family AT5G53040 57.143 1.65e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev08g0788 RWP-RK 1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0788 - - aprc:113850801 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0788 08 4556995 4558435 Aev08g0788 08 4556995 4558435 ECH