Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0776 ATGGCAAGCTTCAGTGAAGACGAGGAATGTCGGTTTTTCGATGCTCAAGAGGATACTGTGTCCTTAGCCGATTCAGAATTTGATGGCACTGACACCCTTGACACCACTTCTACTTCTAAAGAAGCAGTGTTCAGTGGTTTTGACTATGATGTGTGGATTCGGAGCCCAAGGAGTGTCCGAGAGCGTAGGAGAGGGTTTATGAAGATGATGGGGCTGGGTTTGGATGGGGTTGGTCTTGAAAATTCAGTAGATGCGTTTAGTGTTGAGCAGGAAGAGGTGATGGATAGAGTGGGAGATAGTTGTGGGGCCGTGACCAGAACTTGTGATTTTGAAGATGAGTTCTGTTCAACTCGGTCGATGTCTTGTTGGTCCACTGTGAATTCTTTTGGTTCGGTGGAGAACATGGCATGTCAAGATGAGGATTTGGAGAGGGAAGTAGAGTGTGATTTGGATAAGGAAGGGCAGCATAGGAGGATGAGTGATGGAAGAGATTTGGGTCCGAATCAGTTGGTGAATGCAGGGGAACCTGAGGACTCGGAAAACACCTCTCCTTCTTACCACCATTTGGAGAGAAGGGAGAATGAGGAGACGAAGGCTTTTGCGCAGCAGATGAGCAAAGCTAGAATGAGTTGGCTCAGAAGATTGAAAACAATAACGCGCATGATTAATGGGCAAGGTCAAGGTGATGATGGTAAGCAGGAAGGCAGGTGCACATTCTCTGGGGGCAGGCTTCAGAAAGTTAAGGTCCGGCAATGCAAGAAGCAAATGAAAGAACTTTCAGCTCTTTACATGAGGCAAGATATCCAAGCACATGAAGGCTCAATTACAACCATGAAATTCAGTCCTGATGGCCAGTATCTGGCAAGTGGTGGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGGTTGAGGAGGATAGATCTAATGAAATTGACATTTCAGAGATGGATCCATCCTCCATTTACTTTACAGTGAATAATCTTTCTGAATTGACACCACTGTTTATGGATAAGGAAAAAATCAGCAAACTGAAGAGCATGAGAAAAACATCAGATTCAGCTTGTGTCATTTTCCCTCCTAAGATTTTCCGGTTGTTGGAGAAACCATTGCACGAGTTCCGTGGGCACTCAGGCGAAGTTTTGGATCTCTCATGGTCAAAGAATAATTATCTTCTGTCGTCTTCTATTGACAAAACTGTCCGGCTATGGCAAGTCGAATCTGATCATTGCTTGAAAGTTTTTCCACACAGTAATTATGTGACAAGCATACAATTCAATCCTGTGGATGATAATTATTTCATTAGCGGATCTATAGATGGAAAAGTGCGCATCTGGACAATTTCTGATTGTCGTGTTGTTGATTGGACTGATATCAGAGATATAGTAACTGCAGTATGTTATCGACCTGATGGGCAGGGGGGAATTATCGGCTCCATGGCAGGCAATTGCCGGTTTTATAATGTATCAGATAATCAATTGCAGTTGGATTCCCAGCTTTGCCTACTTGGTAAAAAGAAACTTCCTGGAAGAGGGATAACTAGCTTTCAGTTTCTTCCACAAGATATTAACAAAGTTATGGTTACCTGTGCTGATTCACAAGTCAGAATTCTTGACGGGCTTAATGTAATTGGCAAATACAAAGGCATAAGCGCAGGGAGCCCTATGTCTGCATCTTTCACTTCTGATGGGAAACATATTTTATCAGCCTGTGAGGACTCTAATGTATATCTGTGGAACGTTAGTCAGGAAGAGTCGGATCCCATGAAAGCCAAGAAGATTAGGTCTTGTGAGCGGTTTTTCTCAAATGCTTCTGTTGCAGTACCTTGGCATGGTTTGAAATCTCATTCTACTGAAAATGAACATCAATTGAAAGACCTGGATAAAAGGTCACCACAAGCCCCTCATCTCAGTCCACCTGCCTCTTTCTCCCTCAGTCAAGAGTTTTACTTGGAGCCTTTTTCCCAAGGATCGCAACTTGGCCTGAGGAGAACTCCTGTTCAGTTCCAAGGCGAAAACGTCTTCGGTGAATAA 2028 0.4384 MASFSEDEECRFFDAQEDTVSLADSEFDGTDTLDTTSTSKEAVFSGFDYDVWIRSPRSVRERRRGFMKMMGLGLDGVGLENSVDAFSVEQEEVMDRVGDSCGAVTRTCDFEDEFCSTRSMSCWSTVNSFGSVENMACQDEDLEREVECDLDKEGQHRRMSDGRDLGPNQLVNAGEPEDSENTSPSYHHLERRENEETKAFAQQMSKARMSWLRRLKTITRMINGQGQGDDGKQEGRCTFSGGRLQKVKVRQCKKQMKELSALYMRQDIQAHEGSITTMKFSPDGQYLASGGEDGVVRLWQVVEEDRSNEIDISEMDPSSIYFTVNNLSELTPLFMDKEKISKLKSMRKTSDSACVIFPPKIFRLLEKPLHEFRGHSGEVLDLSWSKNNYLLSSSIDKTVRLWQVESDHCLKVFPHSNYVTSIQFNPVDDNYFISGSIDGKVRIWTISDCRVVDWTDIRDIVTAVCYRPDGQGGIIGSMAGNCRFYNVSDNQLQLDSQLCLLGKKKLPGRGITSFQFLPQDINKVMVTCADSQVRILDGLNVIGKYKGISAGSPMSASFTSDGKHILSACEDSNVYLWNVSQEESDPMKAKKIRSCERFFSNASVAVPWHGLKSHSTENEHQLKDLDKRSPQAPHLSPPASFSLSQEFYLEPFSQGSQLGLRRTPVQFQGENVFGE* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0776 675 PRINTS G protein beta WD-40 repeat signature 287 301 IPR020472 -
Aev08g0776 675 PRINTS G protein beta WD-40 repeat signature 432 446 IPR020472 -
Aev08g0776 675 PRINTS G protein beta WD-40 repeat signature 390 404 IPR020472 -
Aev08g0776 675 MobiDBLite consensus disorder prediction 613 630 - -
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats profile. 412 447 IPR001680 GO:0005515
Aev08g0776 675 MobiDBLite consensus disorder prediction 181 199 - -
Aev08g0776 675 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 6 656 - -
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 372 406 - -
Aev08g0776 675 PANTHER WD REPEAT DOMAIN 44 6 656 IPR040324 -
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats profile. 555 587 IPR001680 GO:0005515
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 412 447 - -
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats profile. 268 309 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 497 537 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 261 300 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 447 486 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 365 403 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 406 445 IPR001680 GO:0005515
Aev08g0776 675 SMART WD40_4 538 578 IPR001680 GO:0005515
Aev08g0776 675 MobiDBLite consensus disorder prediction 153 203 - -
Aev08g0776 675 MobiDBLite consensus disorder prediction 613 638 - -
Aev08g0776 675 Gene3D - 232 503 IPR015943 GO:0005515
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 268 301 - -
Aev08g0776 675 Pfam WD domain, G-beta repeat 409 444 IPR001680 GO:0005515
Aev08g0776 675 Pfam WD domain, G-beta repeat 367 402 IPR001680 GO:0005515
Aev08g0776 675 Pfam WD domain, G-beta repeat 269 299 IPR001680 GO:0005515
Aev08g0776 675 SUPERFAMILY WD40 repeat-like 263 582 IPR036322 GO:0005515
Aev08g0776 675 Gene3D - 504 603 IPR015943 GO:0005515
Aev08g0776 675 ProSiteProfiles Trp-Asp (WD) repeats profile. 372 412 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0776 Aev-Chr8 4493344 4495990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0776 268 460 U-box Gene Family AT2G33340 23.077 1.16e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0776 - - gmx:100817209 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3180 03 30189442 30192713 Aev08g0776 08 4493344 4495990 ECH
Aev08g0776 08 4493344 4495990 Aev08g0776 08 4493344 4495990 ECH