Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0769 ATGGCGAGTGAATTGTTGGTTCGCGCTTCACTCCTCCCTGCATCTGAGTTGCTCTCACGGACAGTGTACGATATATTTGATACTGTCAAAGCAGTGAATGAGGTTCTCATCCACAAGGATAATTTCAAGAAATTCTCAGTTCAATTGGAGAAGATCTCATCTATATTGAAGTCTTTATCAATTGAAGATATAAACAATAGTCCTGAGAGCTTGAAAAATGCTATGGATGTTCTCAACCAAGCTATTGCAGTTGCTAAGCACCTTGTTCTTGAGTGCATCAGTAGAAGTAAGGTTTATCTTCTAATCAATTCCAGAAGGATTTTGGCGCGCTTGAAGTGTTGTGCAGAAGATATTAGTCGAGCGCTGAATTTAATCCCTCTGGCCTCTCTGGACATTAACTCTGGTTTGAATAAAAAAATAAGTGAGTTATGTCAGAACATGTTGGATTGTGAGTATCAAGCAGATGAGGAAATCTTGGAGAAGATTGAGAAGGCAATACAAGATGGGAACGCTGATCGGTCGTATGCAAATCAGTTGCTATATTGTATTGCTGATGCTGTTGGGGTCTCCAATGAGCAAGATGCTTTGAAGAGAGAATTCCAAGAGCTGAAGCGTGAAATGGAAAGTGCCAAGTCAAGGAAAGATGTGGCTGAAGCTCTGCATATGGAGCAGCTTATTGCAGTACTTGAGAAGGCTGATTCCATAACTTCGGCGCAGGAGAAGGAAGTTAAGTATTTCCAGAAGAGAAACTCTCTGGGAAGGAGACCCTTGGATGCTCTACAATCATTTTACTGCTCAATCACTCATGATATTATGGTGGATCCTGTGGAGACTTCTTCTGGCAAGACGTTTGAGAGAAGTGCGATAGAGAGGTGGTTTGCTGAAGGGAAAACTCACTGTCCCTTGACCATGTTGCCTCTGGATACTTCAGTCTTAAGGCCGAATAAGACTCTCCGGCAGTCTATTCAGGAATGGAAAGACCGGAATACGATTATTACCATCTCTACTATCAAATCCCAGCTTCAAACAAATGAAGAGGAGGAAGTTCTTCAATCATTGGAAAAATTGCAGGACTTATGCTTGGAAAGAGAGATACATAGAGAATGGTTGAAGATGGAGAATTACATTGCTGTTCTTGTTGGACTCCTTGGTTCTAAAAATCGAGAAATAAGGAAGCGTGTTCTGCTCATCCTGTCTTTGCTTGCAAAGGATAATGCCGAGAACAAGGAGGATATTGCTAAAGTGGATAGTGCACTTGAATCAATTGTTCACTCACTCGCGCGTCAAATTGAGGAAAGAAAGTTAGCACTGGAGTTGCTGTTGGAGTTATCCAGAAGTAACGAGGTGCGTGATCTCATAGGAAACATTCAAGGAAGCATACTTCTAATGGTGACAATGTTAAACTGTGATGATATTGAAGCGGCCAAAAATGCACATGAACTGCTGGAGAATCTCTCTTTCCTTGACCAGAATGTTGTAGAGATGGCAAAGGCAAATTATCTTAAACCTTTGCTGCTGAACCTTTCCACAGGACCAGAAAATATGAAGATAGTCATGACAGAAACTTTGACCGAAATTGCAGTGACTGATCAGATTAAATTGTCATTAGTAAGAGATGGAGCATTGCCACCTCTTGTTCAGATGCTCTTAAAAAATGAAGTGGAAATCAAGAAAGTGGTCGTCGGAGCTTTACTACAGCTCTCAAGCGTGCCAGAGAATGGCCTGCAGATGATTAGGGAAGGTATTGCTCAACCGCTATTAGAACTGCTGTACCATCACAGTTTGCCGTCGCCTACTCTATGTGAACAAGTTGTTGCCACAATAATGCATCTTGCCATTTCAACTACTCACCAACAAACCGAAGCAGAACAGGTTTCATTGTTAGATCCTGAGGATGATGTTTTGAAATTCTTCTCTTTAATTTCGTTAACGGAGCCTGATGTACAAAACAAGATTCTTAAAGCTTTCCAAGCACTGTGCCAATCTTTCTCTGGCTTAACCATCAGAACGAGGTTGAGACAGATCTCGGCTGCTAAAGTATTGGTTCACTTGTTAGAGCTTGGAACCCAAACAGTGCGGGCAAATGCCGTGAAGCTCTTCTATTGCTTGACAGAAGACGGTGATAGCAGCAACCTATCATCACATGTAACTCAAAGATTCATCAAAGTTTTGCTTACCATCATTGAATCTTCTGTTGATGCCGAAGAGATGGTTGCTGCTATGGGTATCATCTCTAAACTACCACAAGAGTCTTACATAACCCAGTGGCTTCTAGATTTTGGAGCACTTCAAACTATTTCGGCTTGTCTCAAAGATCAACATAAACATGCCTTGCACAGGAAGCAAGTAATGGAGAACTCTGTCCAAGCTCTTTGTCGTTTTACCGTCTCGACAAACCTGGAGTGGCAGCAGAGGGTAGCTGAAGCAGGCATGATCCCAATGCTGGTGCAAGTGCTGGTTTCAGGAACACCTATGTCAAAGCAAAGTGCAGCCATTTCTATCAAGCAGCTTTCAGAAAGTTCTTACAGCCTGAGCATGCCGATAAAGAAGCCGCCGAGTTTATTCAAATGCTGCTTCACACCCCGTGAAATCGGTTGCCCTGCACATATAGGCACATGTAGAGTTGAATCTTCATTCTGCATATTAGAAGCAAATGCATTAGAGCCGCTTGTGCGGATGCTATCACAGCAAGATGTTGGAACATGTGAAGCTTCTTTAGATGCATTGATGACATTGCTTGATGGCCAAGCATCACATGGTGGAAGCAAGGTACTTGCGGATGCAAATGCCGTCGAGCCGATGCTACAAATGTTGAGTCTTCCAGCTCCGGGATTGCAGGAAAAGACTCTAATAGCTTTAGGACAAATCTTTCAACTTGAAGAAGTGAAGAACAAGTACAAGGCTAAGGCCACAATGCCATTGGTAGCAGTAACTCAGAGCAAAGACAACCGTTTGAAAAGTCTTGCAGCAAAAGGCCTTTCTCAATTGGGTGTACTTGACAAACAATCTTCTTATTTTTAG 3021 0.424 MASELLVRASLLPASELLSRTVYDIFDTVKAVNEVLIHKDNFKKFSVQLEKISSILKSLSIEDINNSPESLKNAMDVLNQAIAVAKHLVLECISRSKVYLLINSRRILARLKCCAEDISRALNLIPLASLDINSGLNKKISELCQNMLDCEYQADEEILEKIEKAIQDGNADRSYANQLLYCIADAVGVSNEQDALKREFQELKREMESAKSRKDVAEALHMEQLIAVLEKADSITSAQEKEVKYFQKRNSLGRRPLDALQSFYCSITHDIMVDPVETSSGKTFERSAIERWFAEGKTHCPLTMLPLDTSVLRPNKTLRQSIQEWKDRNTIITISTIKSQLQTNEEEEVLQSLEKLQDLCLEREIHREWLKMENYIAVLVGLLGSKNREIRKRVLLILSLLAKDNAENKEDIAKVDSALESIVHSLARQIEERKLALELLLELSRSNEVRDLIGNIQGSILLMVTMLNCDDIEAAKNAHELLENLSFLDQNVVEMAKANYLKPLLLNLSTGPENMKIVMTETLTEIAVTDQIKLSLVRDGALPPLVQMLLKNEVEIKKVVVGALLQLSSVPENGLQMIREGIAQPLLELLYHHSLPSPTLCEQVVATIMHLAISTTHQQTEAEQVSLLDPEDDVLKFFSLISLTEPDVQNKILKAFQALCQSFSGLTIRTRLRQISAAKVLVHLLELGTQTVRANAVKLFYCLTEDGDSSNLSSHVTQRFIKVLLTIIESSVDAEEMVAAMGIISKLPQESYITQWLLDFGALQTISACLKDQHKHALHRKQVMENSVQALCRFTVSTNLEWQQRVAEAGMIPMLVQVLVSGTPMSKQSAAISIKQLSESSYSLSMPIKKPPSLFKCCFTPREIGCPAHIGTCRVESSFCILEANALEPLVRMLSQQDVGTCEASLDALMTLLDGQASHGGSKVLADANAVEPMLQMLSLPAPGLQEKTLIALGQIFQLEEVKNKYKAKATMPLVAVTQSKDNRLKSLAAKGLSQLGVLDKQSSYF* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0769 1006 SUPERFAMILY RING/U-box 247 331 - -
Aev08g0769 1006 SMART Ubox_2 262 325 IPR003613 GO:0004842|GO:0016567
Aev08g0769 1006 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 540 582 IPR000225 GO:0005515
Aev08g0769 1006 Gene3D - 337 427 IPR011989 -
Aev08g0769 1006 Gene3D - 866 1004 IPR011989 -
Aev08g0769 1006 SMART arm_5 874 914 IPR000225 GO:0005515
Aev08g0769 1006 SMART arm_5 529 569 IPR000225 GO:0005515
Aev08g0769 1006 SMART arm_5 799 839 IPR000225 GO:0005515
Aev08g0769 1006 SMART arm_5 918 958 IPR000225 GO:0005515
Aev08g0769 1006 SMART arm_5 570 613 IPR000225 GO:0005515
Aev08g0769 1006 SMART arm_5 405 445 IPR000225 GO:0005515
Aev08g0769 1006 Gene3D - 18 129 IPR036537 GO:0007166
Aev08g0769 1006 ProSiteProfiles U-box domain profile. 258 332 IPR003613 GO:0004842|GO:0016567
Aev08g0769 1006 SUPERFAMILY ARM repeat 334 426 IPR016024 -
Aev08g0769 1006 SUPERFAMILY ARM repeat 502 846 IPR016024 -
Aev08g0769 1006 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 336 IPR013083 -
Aev08g0769 1006 CDD RING-Ubox_PUB 263 304 IPR045210 -
Aev08g0769 1006 Pfam Armadillo/beta-catenin-like repeat 532 569 IPR000225 GO:0005515
Aev08g0769 1006 Pfam U-box domain 263 329 IPR003613 GO:0004842|GO:0016567
Aev08g0769 1006 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 9 1006 - -
Aev08g0769 1006 Coils Coil 186 220 - -
Aev08g0769 1006 Gene3D - 428 625 IPR011989 -
Aev08g0769 1006 SUPERFAMILY ARM repeat 783 1000 IPR016024 -
Aev08g0769 1006 Gene3D - 626 845 IPR011989 -
Aev08g0769 1006 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 44-LIKE 9 1006 - -
Aev08g0769 1006 Pfam MCAfunc domain 29 164 IPR045766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0769 Aev-Chr8 4439690 4443369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0769 261 1006 U-box Gene Family AT1G76390 25.968 8.99e-55 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0769 - - gmx:100818273 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0769 08 4439690 4443369 Aev08g0769 08 4439690 4443369 ECH