Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0754 ATGATGGAAGGAGATGAGTATATTCAAGCATCAAAAGGGAAAAATGTTGAAAGCTTCAGCTGCTCAGACCCACCACAAGCAGAAGCAGAAGCACCTAAAAATACAAAGAAGAAAAAGAGCAAGATAGAGAACAAGAGAAGGTTCAGTGATGAGCAAATAAGATCACTAGAATGCATATTCGAGTCAGAGTCCAAGCTTGAGCCAAGGAAGAAGATTCAGCTAGCAAGAGATCTTGGCCTTCAGCCTCGACAAGTTGCCATATGGTTCCAGAACAGAAGAGCAAGATGGAAATCAAAGAGGATAGAGCAAGAGTACAGGAAGCTCAGAGTTGAATATGACAGTTTAGCAACTCGGTTTGAGTCCCTTAAGAAAGAGAAGGAGTCTCTGCAATTAGAGTTACAGAAGCTAAGTGAGTTGGTGGTGACATCTCAATCTCATGATGGTAGAAGAGAAGGGAAGGTTACAAAGGGAAACAGCACAGATGATGGTGGTTCAGGAAGTGCATACAGCAATTGGAGGGGTGAAGAAGCAAAGCCAAGTTTCTCAAATGAGGGTGTTGAGGATACTACAGCCTTGCATTACTCAGATGATCAAAAGAGCATAAAGGGTGAGAAATCTCATCATGAAGATAGAGGACACCAACTTCTGAGAATGGTTGATGATGATGATGAGAATTTAGAGATTCCTATGGCATCACTTGACAAATGGTACAGTGAAGATCCAAGTGGTATCTTGGATCACTCATGTAGCAGTTCACAATGGTTAGATTTCTGGACCTGA 780 0.4192 MMEGDEYIQASKGKNVESFSCSDPPQAEAEAPKNTKKKKSKIENKRRFSDEQIRSLECIFESESKLEPRKKIQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLRVEYDSLATRFESLKKEKESLQLELQKLSELVVTSQSHDGRREGKVTKGNSTDDGGSGSAYSNWRGEEAKPSFSNEGVEDTTALHYSDDQKSIKGEKSHHEDRGHQLLRMVDDDDENLEIPMASLDKWYSEDPSGILDHSCSSSQWLDFWT* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0754 259 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 2 259 IPR045224 GO:0003700
Aev08g0754 259 Pfam Homeodomain 45 97 IPR001356 GO:0003677
Aev08g0754 259 ProSitePatterns 'Homeobox' domain signature. 74 97 IPR017970 GO:0000981|GO:0006355
Aev08g0754 259 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 259 - -
Aev08g0754 259 SUPERFAMILY Homeodomain-like 35 99 IPR009057 -
Aev08g0754 259 SMART HOX_1 42 103 IPR001356 GO:0003677
Aev08g0754 259 PRINTS Lambda-repressor HTH signature 79 95 IPR000047 GO:0003677
Aev08g0754 259 PRINTS Lambda-repressor HTH signature 70 79 IPR000047 GO:0003677
Aev08g0754 259 MobiDBLite consensus disorder prediction 1 45 - -
Aev08g0754 259 Pfam Homeobox associated leucine zipper 99 139 IPR003106 GO:0006355|GO:0043565
Aev08g0754 259 MobiDBLite consensus disorder prediction 142 222 - -
Aev08g0754 259 CDD homeodomain 45 100 IPR001356 GO:0003677
Aev08g0754 259 Gene3D - 12 96 - -
Aev08g0754 259 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Aev08g0754 259 MobiDBLite consensus disorder prediction 190 222 - -
Aev08g0754 259 Gene3D - 97 142 - -
Aev08g0754 259 Coils Coil 91 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0754 Aev-Chr8 4349750 4350725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0754 33 259 Homeobox Transcription Factor Family AT2G46680 41.667 2.08e-45 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev08g0754 Homeodomain 2.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0754 K09338 - gmx:100793260 320.087