Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0743 ATGTCACATGCAAGGCAGAACAGGATGATGAGTCCAAAACAAGTTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGATTGGCTTGGGAGACTAAGAGAGATACCCTCAAACGCTACTTTGATCAGTTTGGTGAGATCTTAGAAGCTGTTGTCATCACTGACAGAAACACTGGAAGATCAAAAGGATATGGATTTGTTACCTTTAAGGACCCAAATTCTGCAATCAGAGCATGCCAGAATCCCTATCCTATGATAGATGGAAGGAGAGCTAATTGTAATCTTGCAGCTCTTGGTGCACAAAAAATTGATCCTTCCATCACAGGGAAGCAGAAATTCATTAGCCCTTCATGGACTACATCACCTATCCCAATTCAAGGAACCTCCACTTATTATAATCAGCATATTCCACAGTATACATTTCACTATCCACCCTACAGGTACCCTGGTTATCCTCCCCAACAAGAAACTTATGATCAAATGAATTACTATAATGCATATGTTGGACAGGCCCTTCAATATCGGTTTTTACCAGCATATTACCAACCTATTTATGGCCTTAGTAGACAGTTTAATCCGTATGTGAAAAAGACACAATTCCCTGCTGAAATGCCACCTGCTGCCTTGTCACAACCTATTTCAACCTCTTCTTCAATTTCCAGCACAGGATTAACCACAGGAAGAGTAGATGAAACAGGGGTGGTATTAGGATCCCCACAAGAACAGAAACCTTCAGGTTAA 741 0.4103 MSHARQNRMMSPKQVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNTGRSKGYGFVTFKDPNSAIRACQNPYPMIDGRRANCNLAALGAQKIDPSITGKQKFISPSWTTSPIPIQGTSTYYNQHIPQYTFHYPPYRYPGYPPQQETYDQMNYYNAYVGQALQYRFLPAYYQPIYGLSRQFNPYVKKTQFPAEMPPAALSQPISTSSSISSTGLTTGRVDETGVVLGSPQEQKPSG* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0743 246 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIF) FAMILY PROTEIN 1 242 - -
Aev08g0743 246 MobiDBLite consensus disorder prediction 206 246 - -
Aev08g0743 246 Gene3D - 1 106 IPR012677 -
Aev08g0743 246 CDD RRM_RBM24_RBM38_like 21 96 - -
Aev08g0743 246 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 98 IPR000504 GO:0003723
Aev08g0743 246 SMART rrm1_1 22 94 IPR000504 GO:0003723
Aev08g0743 246 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 81 IPR000504 GO:0003723
Aev08g0743 246 MobiDBLite consensus disorder prediction 209 228 - -
Aev08g0743 246 SUPERFAMILY RNA-binding domain, RBD 14 96 IPR035979 GO:0003676
Aev08g0743 246 PANTHER BOULE-RELATED 1 242 IPR037366 GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0743 Aev-Chr8 4279748 4281325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0743 17 97 C2H2 Transcription Factor Family AT2G19380 43.210 1.15e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0743 - - gmx:100788634 347.051