Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0741 ATGCAAGAACCCATGGGTCTTTGTCATCTCGAAGCCCAAATGCTTTTTAGGGCCCATAGTCCATATATCATCGATTCATACTTCAACCCTAGTCCCTATCCTTTTCTCCCTTTTCTCTTCGCTCTCTATCGTATTCGAAAGGACCTTGTTCTCCAGCTTCAGCCTCAGCCCTATCTGCTGCAGCTTCGCGAAGGAACTGTACAACTTCTTCAATCAGATATGAGTGGTCGCTTTTCTCGCACAATTTATGTTGGCAATCTGCCCTCTGATATCAGAGAATCAGAAATTGAAGATCTATTCTACAAGTATGGCCGCATAATGGATATTGAGTTGAAGATTCCACCCCGCCCTCCATGTTATTGCTTTGTTGAGTTTGACAATGCTCGAGATGCTGAAGAAGCGATTCGAGGTCGAGATGGATATAACTTTGATGGTTGTCGGCTAAGGGTGGAGCTTGCCCATGGTGGTAGAGGGCCATCATCAAGTGATCGCCGTGGATATGGAGGAGGAGGAGGAGGTGGTGGTGCTGGTGGTGGTGGTGCTGGTCGCTTTGGCATCTCACGCCATTCTGAATATCGAGTTATTGTTCGTGGACTTCCCTCTTCTGCTTCCTGGCAAGATTTGAAGGATCATATGCGAAAAGCTGGTGATGTATGTTTTGCTGAGGTGTCTCGTGATAGTGAAGGGACTTATGGCATTGTTGATTACACTAATTATGATGACATGAAATATGCGATTCGGAAACTGGATGACACAGAGTTCAGAAATCCTTGGGCGAGATCTTATATTCGGGTGAGGAAGTATGAGAGTAGTCGTTCAAGGAGCCGCAGCAGAAGCCCCAGCAGGAGCAGGAGTCCTAAGAGGGACAGAAGATCTTTGGAGCGATCTGTGTCTAGGTCACGATCTAGATCCAGATCAGCATCACCAATCAAGTCTTCCAGGCCTAGGTCACGATCACAATCACGATCTGCATCACCACGCCAGGTACTCAAAGCTTTTTTAATTAAATGGCGCTGTCAGGAAGTGCTTGATATTCTCACAAATGCAGCTGGTTCTCTGGTTTTAGCATCCCATTCTGGGAAGTCTTAG 1089 0.4656 MQEPMGLCHLEAQMLFRAHSPYIIDSYFNPSPYPFLPFLFALYRIRKDLVLQLQPQPYLLQLREGTVQLLQSDMSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAEEAIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGGGGAGGGGAGRFGISRHSEYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGIVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYESSRSRSRSRSPSRSRSPKRDRRSLERSVSRSRSRSRSASPIKSSRPRSRSQSRSASPRQVLKAFLIKWRCQEVLDILTNAAGSLVLASHSGKS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0741 362 Gene3D - 68 191 IPR012677 -
Aev08g0741 362 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SR34A 75 329 - -
Aev08g0741 362 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 80 155 IPR000504 GO:0003723
Aev08g0741 362 SMART rrm1_1 81 151 IPR000504 GO:0003723
Aev08g0741 362 SMART rrm1_1 193 266 IPR000504 GO:0003723
Aev08g0741 362 CDD RRM2_SF2_plant_like 192 267 - -
Aev08g0741 362 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 75 329 - -
Aev08g0741 362 MobiDBLite consensus disorder prediction 302 325 - -
Aev08g0741 362 SUPERFAMILY RNA-binding domain, RBD 79 259 IPR035979 GO:0003676
Aev08g0741 362 MobiDBLite consensus disorder prediction 154 180 - -
Aev08g0741 362 MobiDBLite consensus disorder prediction 269 325 - -
Aev08g0741 362 Gene3D - 192 269 IPR012677 -
Aev08g0741 362 MobiDBLite consensus disorder prediction 286 301 - -
Aev08g0741 362 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 194 256 IPR000504 GO:0003723
Aev08g0741 362 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 82 149 IPR000504 GO:0003723
Aev08g0741 362 CDD RRM1_SF2_plant_like 81 152 - -
Aev08g0741 362 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 192 270 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0741 Aev-Chr8 4257772 4261936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0741 79 276 Eukaryotic Initiation Factors Gene Family AT4G34110 23.786 4.82e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0741 K12890 - gmx:100800653 352.829