Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0740 ATGGGTTCCAGCGAATTGGGTTGCACCTATGCCACTCTCATTCTCCACGATGATGGAATCCCAATCACCGCGGAGAAGATTACCACTCTTTTGAAGGCTGCTAATGTCACCGTTGAATCCTACTGGCCCAGCCTCTTCGCCAAGCTTGCACAGAAGAGAAACGTCGAGGACATCGTCTTGAATGCTGGATCTGGAGGTGGTGCCGCCGTCGCCGTCGCCGCTTCTGGTGGTGCTGCCGCTGGTGGAGCTGCCGAGGCCGCCGCACCTGCCAAAGAGGAAAAGAAGGAGGAAGTTAAGGAAGAAAGCGATGATGATATCGGTTTCGGTCTATTTGATGATTAG 342 0.538 MGSSELGCTYATLILHDDGIPITAEKITTLLKAANVTVESYWPSLFAKLAQKRNVEDIVLNAGSGGGAAVAVAASGGAAAGGAAEAAAPAKEEKKEEVKEESDDDIGFGLFDD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0740 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 112 - -
Aev08g0740 113 MobiDBLite consensus disorder prediction 88 105 - -
Aev08g0740 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 1 112 - -
Aev08g0740 113 MobiDBLite consensus disorder prediction 83 113 - -
Aev08g0740 113 CDD Ribosomal_P1 5 61 - -
Aev08g0740 113 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aev08g0740 113 Gene3D - 2 63 IPR038716 -
Aev08g0740 113 Pfam 60s Acidic ribosomal protein 22 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0740 Aev-Chr8 4254508 4256539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0740 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 55.263 7.48e-40 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0740 K02942 - ncol:116261452 127.872