Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0733 ATGGGTGAGGTGGTGATGAGTGGCGGCGGCGGCGGCGACAAGCTAGTGGAGGAGGTGGAGAAGGAGATGACGGTGGTGGTGGAGGAAGGGGAAGAGACAGGGACTGAGAGCAGAGGAGGAGAATTGAAGGGGCTGATGAGGTGGGAGAAGTTCTTGCCCAAGATGATTCTGAGGGTTCTGTTGGTCGAAGCTGACGACTCCACCAGGCAGATTATATCCGCGCTTCTCAGGAAATGCAGCTACAAAGTGGCTGCTGTTCCTGATGGCTTGAAGGCATGGGAAATACTCAAGGGGAGACCACGGAATATCGACCTAATACTGACAGAAGTGGATTTGCCAGCTATATCTGGCTATGCACTTCTCACATTGATTATGGAGCATGAGATTTGCAAAAATATCCCTGTCATAATGATGTCCTCACAAGATTCAATAAGCACAGTTTACAAATGCATGTTGAGGGGTGCTGCTGACTATCTTGTTAAGCCCATCAGAAAAAATGAACTGAGGAATTTGTGGCAGCATGTTTGGAGGAGACAATCATCAACCAGTGGCACAAATGGCCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACAGCTGAAAACAATGATGCTAGCAATCGTTCAAGTGGTGATGCTGCTTGCATTCAGAGAAATAAGGAATTGATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACAAAGCCCGACTTGGAAGCTGAGAGTGGCCCTGTCGATAACGTTCAGGAATTGGCTCCTCTTAGATGCGGTGAATCATATCCAAGTGGAACAAAGACAAAAGAGGTTGAAACAAGCATTTGTTTAGGGCAGTCATCAACCATGCATGACAGTCATGCTGGAGGATTGGGTTTGGCCGTCGGCAAAAGCGGTGAGGCGAGCATGACTAATGGCAAGGATGGTGATCCAGAGCATTTTAAGAGTGGTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAGCTGTTCTAAGGAAGCTATTGACTTGATTGGAGCATTTAATACTCATCCAAACTGCAGTATCAAAAATTCCACAGTTAATTGCACAGGAAAGTTTGACTTTGCTCCACAGTTGGATCTTTCCCTGAGAAGAGCTAATCCCACCATCTTTGAGAATGAACTCACTGAAGAACGGAACACCCTCATGCATTCTAATGCTTCAGCTTTCAAGAGGTATACTAACAGGCAATTGCAAGCCTCACCTGCAATGTTAATCAACTTCTCTGACCAACAAAGAGAGCAGAGAACAGATTGTGAGAAAAGCATCTCCCATTTTGCTGCTGGTTGTAACTCAGATAGTTCAACACCAAGTATGCAACGGGGCCTTATATCTCCAACTACACCCCAATCAAAAGAATCTGAAGCGGCCACTTCACACTCACAGCAAGGGCATTCTCTCCCTATTCAAGTAAAAGGTGTACGATTCAATGATCTGCGCACAGCCTATGGTTCTGTACTTCCTCCTATGTTTCGCACGCAGTCTGGTCCACCATCAGTGCCGAGTCCAAGTTCAGTTGTGCTCCAAGAACCAGCGAGCCAAGTAAATGCATTTTATCAGCCAAATGGCAAAGAATATAGTTCAGAGCAGCTTTATGAATCTCGAGGTCCTAATGTGAAAAGTGCTCCAAATCACATGGTGTACAGACAGGAACATAAGTCAGAATACGCAGAGGATCGAGGACATATCTCTCCAACAACTGATCAAAGTGTATCCAGTAGTTTGTGCAATGGAAATGCAAGTTATCTTAATAGCATGGGTTATGGAAGCAATTGTGGTAGTAACAGCAATGTTGATCAAGTTCCCATAGTCAGAACAGCTTCAGAGGGTAAGAATGAAGATGTCACAAACAATGCGAGTTCTCATCGATCTATGCAGAGAGAAGCTGCTCTAAATAAGTTCCGCATGAAAAGGAAAGAGAGATGCTATGAGAAGAAGGTTCGTTATGAGAGCAGAAAGAAACTGGCAGAGCAGCGTCCCAGGGTGAAAGGTCAATTCGTTCGTCAAGTTCATCCTGATCCTCTTGCTGCAGAGAAAGATGCCAAAGAATACAATCCTTAG 2091 0.4529 MGEVVMSGGGGGDKLVEEVEKEMTVVVEEGEETGTESRGGELKGLMRWEKFLPKMILRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWEILKGRPRNIDLILTEVDLPAISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSTSGTNGPQDESVAQQKVEATAENNDASNRSSGDAACIQRNKELIEKGSDAQSSCTKPDLEAESGPVDNVQELAPLRCGESYPSGTKTKEVETSICLGQSSTMHDSHAGGLGLAVGKSGEASMTNGKDGDPEHFKSGSISGEAHDNHYVQISCSKEAIDLIGAFNTHPNCSIKNSTVNCTGKFDFAPQLDLSLRRANPTIFENELTEERNTLMHSNASAFKRYTNRQLQASPAMLINFSDQQREQRTDCEKSISHFAAGCNSDSSTPSMQRGLISPTTPQSKESEAATSHSQQGHSLPIQVKGVRFNDLRTAYGSVLPPMFRTQSGPPSVPSPSSVVLQEPASQVNAFYQPNGKEYSSEQLYESRGPNVKSAPNHMVYRQEHKSEYAEDRGHISPTTDQSVSSSLCNGNASYLNSMGYGSNCGSNSNVDQVPIVRTASEGKNEDVTNNASSHRSMQREAALNKFRMKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVHPDPLAAEKDAKEYNP* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0733 696 Gene3D - 55 257 - -
Aev08g0733 696 MobiDBLite consensus disorder prediction 620 636 - -
Aev08g0733 696 SMART REC_2 57 172 IPR001789 GO:0000160
Aev08g0733 696 Pfam Response regulator receiver domain 59 170 IPR001789 GO:0000160
Aev08g0733 696 PANTHER TWO-COMPONENT RESPONSE REGULATOR 38 672 IPR045279 GO:0009736
Aev08g0733 696 MobiDBLite consensus disorder prediction 662 676 - -
Aev08g0733 696 Pfam CCT motif 637 679 IPR010402 GO:0005515
Aev08g0733 696 MobiDBLite consensus disorder prediction 616 636 - -
Aev08g0733 696 MobiDBLite consensus disorder prediction 662 696 - -
Aev08g0733 696 MobiDBLite consensus disorder prediction 440 478 - -
Aev08g0733 696 ProSiteProfiles Response regulatory domain profile. 58 176 IPR001789 GO:0000160
Aev08g0733 696 MobiDBLite consensus disorder prediction 564 584 - -
Aev08g0733 696 ProSiteProfiles CCT domain profile. 637 679 IPR010402 GO:0005515
Aev08g0733 696 SUPERFAMILY CheY-like 57 183 IPR011006 -
Aev08g0733 696 MobiDBLite consensus disorder prediction 178 214 - -
Aev08g0733 696 PANTHER POPULUS TRICHOCARPA PSEUDO-RESPONSE REGULATOR 5A MRNA 38 672 - -
Aev08g0733 696 CDD psREC_PRR 59 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0733 Aev-Chr8 4212891 4217157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0733 619 681 Response Regulator Gene Family AT5G24470 73.846 2.03e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aev08g0733 Response_reg 6.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0733 K12130 - gmx:100777119 1063.91