Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0704 ATGGAGACTCTGAAAGCTGCGATTCCCGAAGGCTTGAAGCGAATGATCGGAGATAGCTCCGTCGATGATCTTCGCGTCACTTGCTCCTCTCTTCACAGCTTTTTCCTCAACTTCGAGCCATTTCACCAGTTGGTGACGGAATTGGCGGATCCGAAGTATGCTCTGTGCGGCAAGAGCAAGGACGATGCGTTGGAATCAAAGCAGCTCGGAAATCAGTGCTTCTCGAAAGGAGATTATGCGAAGGCTTTGGATTGCTATACACAGGCACTGCGCAAGGCTCCTTTGGAGGCTGGTGATATGGAGAATAATCTGGTTGCAACGTTGTATATTAATCGAGCTACTGTATTGCATAAAATGAGTCTATTGATGGAGTGTTTGCGAGATTGCACTCGTGCCCTTCAGATATGTCCAGGATATGCAAAGGCATGGTACAGGAGAGGTAAGGCAAATGCTTCATTGGGAAATTATGATGATGCAATATGTGACCTAAATGTGGCTAACATTGCGGAATCATCATTGGGCGGGAAGAGACAAATAGAAAGTGAGCTGAAAAATATTTTAGACATTAGCAAGAGTAAAAGTGCAGTCATACAGCACAAGGAGAGCTTGACTACAGTTGGTGAGGAGCCCCAAATAAAGTTACAGTGTGTCGCCATACCTGAGAAAGGAAGAGGCATGGTATCATCATGTGACATTTCAGCAGGATCTTTGGTCCATAATGAGGAACCTTATGCTATGATAATATTAAAGCAATGCCGGGAGACTCATTGCCATTATTGCTTGGATGACCTACCTGCTGATAGAGTTCCCTGTAGATCCTGTTCAATACCACTGTATTGCTCCCAGCAATGCCAGATACAGGCTGGAGGGAAAATGTTCAGGATTTTCCCAGAAGTTCATGGCATTCTTGAAAAGTTACCCACTGATCTTGGAGAATATGCTGCCAAAGTTATTCAAGACCATGATTCTGAACAAGAAATTGATGGTATCTCTGAACATAAACACGAATGTCAAGGCGTACACTGGTCTGCAGTACTGCCATCAGAGGTAGTTTTGGCTGGACGAATACTGGCAAGGTTTTTGCCAAAGAGCACATCTGAAGATATTACACACTTTGTGGAAGGGCTGGAGCTTTCCCATTGTTATAAACATATGCTTTCTGAAAGCAAATTGGATTCACATATGTATGCCCTCGTGTTATTATATTGTCTTCGACATTCTTGTGGTGCTGTGTTTTCCATAGATGGAGTATCCATCTCTCAGGTTGTCATAATTATTTCTCAAATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAATCAAAAGATGCTCATGGACTATCAGATCAGTTTGGAGAATCTTCATCCAGTACATATTTAACTAGTAATGTGGAACAGGTCAGGGTGGGTAAAGCTATTTATAAAGCTGGAAGTTTATTCAACCACTCTTGCCAACCAAATATTCATGCATATTTTCTTTCACGTACTCTCTTTATACGAACAACAAAAGTCGTATCTGCTGGGTCTGAGCTGGAAATGTCTTATGGTCCACAGGTTGGGTTATTGGATTGTAAAGATCGCCTTCATTGTCTCAAAGATGAGTACTTGTTTCAGTGTCAGTGTACTGGTTGTAAAGAAGTCAATCTATCTGACATTGTCCTCAATGCTTTTCGATGTGTCAATCCCAATTGTTCTGGTGCGGTGTTGGAAAGCAGAGTAGTTAACTGCGAAAAGCAGAAATTGAAGCACTTAAGTAATTTTAAGGTAGACAAGAGTGATGATATTTCTAAAGTGTTCAACCAAAATGATGGCTCCCTCCATATTCAACCTGGATACTGTTTAAAATGTGGTTCTTACCTTGATTTGGAGTCTTCACATGCTGAAGTTGATAAAGCTTTAATATCCATAAAAAGGTTGCAGGATGCGATGATGTCAAAAGAAATTTCAAATAAAATGATTACAGATGCTTTGAGATCTCTTCATTTGCTAAGATCAAATTTGCATGCATACAACAAGGTTATTGCAGAGGTAGAGGACAACCTTGCACAAGCCTTTTGTTTGGTGGGAGAACTACAATCATCTATGGACCATTGTAAAGCATCTATCCAGATCCTGGAGAAGCTATATGATCCTGATGATATAGTCATTGCTTATGAACTAGTGAAGCTTTCGTCCATCCAACTTTCCTTGGGTGATGGTGCGTTCTCGGACCCCTGTGAGTCCGAATCTGAACTCCGTTGTATCTGTCCAACTGCTAGCTCCTTTGGAAGCAGCTAG 2277 0.4141 METLKAAIPEGLKRMIGDSSVDDLRVTCSSLHSFFLNFEPFHQLVTELADPKYALCGKSKDDALESKQLGNQCFSKGDYAKALDCYTQALRKAPLEAGDMENNLVATLYINRATVLHKMSLLMECLRDCTRALQICPGYAKAWYRRGKANASLGNYDDAICDLNVANIAESSLGGKRQIESELKNILDISKSKSAVIQHKESLTTVGEEPQIKLQCVAIPEKGRGMVSSCDISAGSLVHNEEPYAMIILKQCRETHCHYCLDDLPADRVPCRSCSIPLYCSQQCQIQAGGKMFRIFPEVHGILEKLPTDLGEYAAKVIQDHDSEQEIDGISEHKHECQGVHWSAVLPSEVVLAGRILARFLPKSTSEDITHFVEGLELSHCYKHMLSESKLDSHMYALVLLYCLRHSCGAVFSIDGVSISQVVIIISQIKVNCMTVVRLKSKDAHGLSDQFGESSSSTYLTSNVEQVRVGKAIYKAGSLFNHSCQPNIHAYFLSRTLFIRTTKVVSAGSELEMSYGPQVGLLDCKDRLHCLKDEYLFQCQCTGCKEVNLSDIVLNAFRCVNPNCSGAVLESRVVNCEKQKLKHLSNFKVDKSDDISKVFNQNDGSLHIQPGYCLKCGSYLDLESSHAEVDKALISIKRLQDAMMSKEISNKMITDALRSLHLLRSNLHAYNKVIAEVEDNLAQAFCLVGELQSSMDHCKASIQILEKLYDPDDIVIAYELVKLSSIQLSLGDGAFSDPCESESELRCICPTASSFGSS* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0704 758 SUPERFAMILY TPR-like 59 166 IPR011990 GO:0005515
Aev08g0704 758 SUPERFAMILY SET domain 212 546 IPR046341 -
Aev08g0704 758 ProSiteProfiles SET domain profile. 210 516 IPR001214 GO:0005515
Aev08g0704 758 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Aev08g0704 758 SMART tpr_5 106 139 IPR019734 GO:0005515
Aev08g0704 758 SMART tpr_5 675 708 IPR019734 GO:0005515
Aev08g0704 758 SMART tpr_5 140 173 IPR019734 GO:0005515
Aev08g0704 758 SMART tpr_5 63 96 IPR019734 GO:0005515
Aev08g0704 758 Pfam SET domain 223 516 IPR001214 GO:0005515
Aev08g0704 758 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 735 - -
Aev08g0704 758 Gene3D Tetratricopeptide repeat domain 521 739 IPR011990 GO:0005515
Aev08g0704 758 Gene3D Tetratricopeptide repeat domain 38 202 IPR011990 GO:0005515
Aev08g0704 758 Coils Coil 660 680 - -
Aev08g0704 758 Gene3D SET domain 417 515 IPR046341 -
Aev08g0704 758 Pfam Tetratricopeptide repeat 69 96 IPR019734 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev08g0704 SET 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0704 K24634 - gmx:100783548 1104.35