Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0692 ATGGGGAGAAGACCGGCAAGATGTTACCGTCAGATTAAGAATAAGCCATACCCCAAATCACGGTTTTGCCGTGGTGTGCCTGATCCTAAGATCAGGATTTATGATGTTGGTATGAAGAAGAAGGGTGTTGATGAGTTTCCTTTCTGCGTCCATTTGGTTAGTTGGGAGAAGGAAAACGTTTCAAGTGAAGCATTGGAGGCTGCCCGTATTGCTTGCAACAAGTACATGGCCAAATTTGCTGGAAAGGATGCATTCCACTTGAGAGTCAGGGTACATCCATTCCATGTTCTTAGGATCAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAGACTGGAATGAGGGGTGCTTTTGGAAAACCACAGGGTACCTGTGCTAGAGTTGCCATTGGTCAGGTCCTTCTTTCTGTCCGCTGCAAGGATAGCAACAGCCATCACGCACAAGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGTCGCCAAAAGATCATTGTTAGCAGGAAGTGGGGTTTCACCAAGTTTAACAGAACTGATTATCTCAAATACAAGTCCGAGAACAGGATTATGCCCGATGGTGTGAATGCAAAGCTTCTTGGGTGCCATGGACCATTGTCTAACCGTCAACCTGGAAGAGCATTTTTGTCAGCCGCTTCTGCTTAG 666 0.4715 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKYKSENRIMPDGVNAKLLGCHGPLSNRQPGRAFLSAASA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0692 221 ProSitePatterns Ribosomal protein L10e signature. 108 129 IPR018255 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 CDD Ribosomal_L16_L10e 41 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 PANTHER 60S RIBOSOMAL PROTEIN L10 1 219 IPR001197 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 PIRSF RPL10a_RPL10e 1 182 IPR001197 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 Pfam Ribosomal protein L16p/L10e 12 166 IPR016180 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 Gene3D Ribosomal protein L10e/L16 1 218 IPR036920 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 PANTHER 60S RIBOSOMAL PROTEIN L10-LIKE 1 219 - -
Aev08g0692 221 SUPERFAMILY Ribosomal protein L16p/L10e 4 173 IPR036920 GO:0003735|GO:0005840|GO:0006412
Aev08g0692 221 TIGRFAM uL16_euk_arch: ribosomal protein uL16 1 174 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0692 Aev-Chr8 4002106 4003713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0692 1 220 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.273 2.30e-145 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0692 K02866 - pvy:116105818 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2032 07 21470995 21473009 Aev08g0692 08 4002106 4003713 PCT