Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0680 ATGGCTGCCATTGACACCACAAAGAATTTGGTAGCTTCGGCTCTCTGCAAGCACCTTTCGTTGGATCCTAATGTTATTCCAGCTGATAGTTTAGGTGGCGATATTAAGAGTCTCTACTCGAACATCACCGCAGCGTCTGGAGATAAGGTTAATCACAGCGATGAGGTGTTGAAGTGGGTAGCATTTGCAGATGCTTTCCCTGTTGCCCAAGAAGCAAGTTTTGAGAATCTCAAGAAGTTAAATGATGAATTGTCTCTGAAGTCCGTGTTACTGGGAAATGGATTGAAACCCTCGGAAGCCGATGTTATAGTGTTTTCGGTCATTCATTCTTCCCTGATCAACCTTTCAGATACAAACAAGGAAAAACTTCCTCATGTCTTGAGATGGATGGATTACATCCAGCACAAGGAGGAGTTTGTAGGTTTATTTGAGAAAATATTGTTGAAGAAGCCTGAGTTTGAGCCTCCGGTGACAAAACCTGCTACAGCTGTGGAAGCTGATTTAAAATCAACCAAGACTGAGCAAAACGTAAAGAATGTAAACAAGTCAGAACCCGACACAAGCAAGGACAAAAACAAAGCAGATGGAAAGCCAGTTGGTGACAAAGAACCTACAAAAGCCAAGGCCAAACCTGCCGACAAAGAACCTGCAAAAGCCAAGGCCAAACCTGCTGACAAAGAAGTGCCTGAAAAAGACAATGAACTCAGCGTCAGTTTGCTTAATATTCAAGTTGGACTGATTCGCAAAGCGTGGAAGCATCCATCTGCTGATAGTTTGCTAGTTGAGGAGATAGATGTTGGAGAAGCCAAATTGCGACAAGTTGTTAGTGGTTTGGCAAAGTACTGTAGTCCTGATGAGTTGACGAACCGTCGCGTTGCCCTTATCACAAATGTCAAACCTGGAAAACTGCGGGATGTGTTGTCTGAAGGACTGGTCTTGTGTGCTTCTAGTGAAGATCATAGCACTGTTGAGCCATTGCTCCCCCCAGAAGGAGCTAAGATTGGGGAACGCATTTCTTTTTCCGGGATTGATGGAAAGCCGGAAGATGTACTAAACCCAAAGAAGAAACAACTGGAGAAGATCACACCGCATCTTTTCACTGATGAGAAGGGTGTTGCCACATTCAAGGGAATACCATTTATGACCTCAGAAGAATCTCTAGCCTTTGGTACAGTATCTCAGTATCTGGGGATGACATTGGGAGGGAACAAAGCAACAATGGCTTCTGGGTCTGCAGGTTCATCTTCTTGGGCATCTTCAAATTGGGTCATGGAAAGTGGCGGCAATGTTCCTCATGTTCTTGCTGTTGATGACAACCTCATTGATCGCAAACTTGTTGAGAAGCTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAACGGGCCAAGGGCACTGGAGTTCTTGGGCTTGACTAGTGGTGAACAGAACAACTTGAATGGGAGATCCAAAGTAAATTTGGTCATCACAGACTATTGCATGCCAGGGATGACAGGCTATGAGCTGCTTAAGAAAATTAAGGAATCGTCCAGCATGAGGGAGGTTCCTGTAGTGATAATGTCATCTGAGAACATACCAACAAGGGTTAACAAGTGTTTGGAAGAAGGAGCTCAGATGTTCATGTTAAAGCCCCTCAAACAAGCTGATGTAAAGAAACTGACATGTCAGTTAATGAATTGGGAAGCTGAAACTTAG 1698 0.4399 MAAIDTTKNLVASALCKHLSLDPNVIPADSLGGDIKSLYSNITAASGDKVNHSDEVLKWVAFADAFPVAQEASFENLKKLNDELSLKSVLLGNGLKPSEADVIVFSVIHSSLINLSDTNKEKLPHVLRWMDYIQHKEEFVGLFEKILLKKPEFEPPVTKPATAVEADLKSTKTEQNVKNVNKSEPDTSKDKNKADGKPVGDKEPTKAKAKPADKEPAKAKAKPADKEVPEKDNELSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPDELTNRRVALITNVKPGKLRDVLSEGLVLCASSEDHSTVEPLLPPEGAKIGERISFSGIDGKPEDVLNPKKKQLEKITPHLFTDEKGVATFKGIPFMTSEESLAFGTVSQYLGMTLGGNKATMASGSAGSSSWASSNWVMESGGNVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEFLGLTSGEQNNLNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMREVPVVIMSSENIPTRVNKCLEEGAQMFMLKPLKQADVKKLTCQLMNWEAET* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0680 565 SUPERFAMILY CheY-like 431 559 IPR011006 -
Aev08g0680 565 Gene3D - 428 564 - -
Aev08g0680 565 ProSiteProfiles Response regulatory domain profile. 432 559 IPR001789 GO:0000160
Aev08g0680 565 SMART REC_2 431 555 IPR001789 GO:0000160
Aev08g0680 565 MobiDBLite consensus disorder prediction 159 231 - -
Aev08g0680 565 ProSiteProfiles tRNA-binding domain profile. 236 339 IPR002547 GO:0000049
Aev08g0680 565 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 11 386 - -
Aev08g0680 565 Pfam Response regulator receiver domain 433 553 IPR001789 GO:0000160
Aev08g0680 565 SUPERFAMILY GST C-terminal domain-like 45 142 IPR036282 -
Aev08g0680 565 PANTHER AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1 11 386 - -
Aev08g0680 565 MobiDBLite consensus disorder prediction 168 182 - -
Aev08g0680 565 CDD GST_C_Arc1p_N_like 51 148 - -
Aev08g0680 565 MobiDBLite consensus disorder prediction 183 231 - -
Aev08g0680 565 Gene3D - 35 150 - -
Aev08g0680 565 Pfam Putative tRNA binding domain 242 336 IPR002547 GO:0000049
Aev08g0680 565 CDD REC_typeA_ARR 433 554 - -
Aev08g0680 565 CDD tRNA_bind_EMAP-II_like 235 339 - -
Aev08g0680 565 Gene3D - 236 396 IPR012340 -
Aev08g0680 565 SUPERFAMILY Nucleic acid-binding proteins 238 387 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0680 Aev-Chr8 3942826 3950514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0680 432 563 Response Regulator Gene Family AT3G56380 71.642 1.25e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g0680 Response_reg 4.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0680 K15437 - gmx:100779769 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0680 08 3942826 3950514 Aev08g0680 08 3942826 3950514 ECH
Aev07g1964 07 20810779 20811570 Aev08g0680 08 3942826 3950514 PCT