Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0678 ATGTCCGCCGAAGACATCGGTCTCGTCCCTGACCAGAGGATCGAATCCGGTCTCACCTCCCCAATCGTCTTCCAAGACGACCCTATTCGCTTCACCCGGGTCGGTGACCCGCCCCCCAAAACCCGAGAGCTTAGCGGGTTTATCGACGACAAGATGTTCTCCATCGACCGCGACCGCTTCTTTTCCGCCCAGGGCTCCGAGTTCCGCCGCAGCGTCTACGGAGACTGCTCCGCCCGCCGCGACCACCCTGACGCCCGCAATTGGAGCGGCAACGGCAGCACCGCCACTCCCAGCGGCGATGAATCCGACGGCGACGATGACGAAGAGGAAGACGATGATGACGATGACGACGATGATGTAGATGGGGATAACGACGTGGACAGGCTTGTTGGTGTTGCTGATGCGAGCAAGCGCAATTCGAACGCAATCGGTGACATCAACGGTGTTGCTAATGGGAAAGGACAGCACCATTCCCCTTATGGTATGAGGAATCAAGAGAAAAAGATTGCATCTTTTAATGTTGACATTCTGGTTACTAGTAGAGATATGTTGGGGAAGGGTGGTGATATTGGGCAATTGGTGCATAACAATGCTTGTGGTACTGATGAAGATCATCATCATCGGAGAGAGAGATTGGGGAAGTCTCATAGTGCTGTTACCATTGCTGAAACTGACTGTGAGGAGTATTATTCCCACTATCTTCAAGGTGGTGAAGGATCGGCTTCTGTGCACAAAGTTATGGTGGATGAGAATGGCTGTGGGTTTAGTGGGAGAAAGGACGTTCTGTATTCGAGCGAGTCAGGGGAGTCCTTGAGGAAAATTCTTTCAGATCCTGTCACGGGTGCTCTTATGGATGATGCCATGATATTACCTTGTGGGCATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTGCACTTGTTCACAACCCACATCTGAGGAATCAATATCGCCAAACCTATCACTTCGAGCTGCTGTGCAGGCATATCGGCGTGAAGAGGAGTCACAATTTTACCGGTCATCCAAAAGAAAAAGAGAACGATTTGATCAGGGTGGTTTTGGAGATTCAGCTGTTATTGAACCACCAAGAACGAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTATCATAAAGGGGAACAAAAGGACACCACAACGCTTTGTTGGGCGTGAAGCTATTGTAACAACACAGTGCCTTAATGGATGGTATGTGGTGAAGACATTGGACAATGCAGAGAGTGTGAAGTTGCAGTATCGCTCCCTTGCCAAGGTCTTAGATGATCCTTCAAAACCTGCCACCACCACCAGTAAGATGGGACCCAATTGGCGTTAA 1356 0.4985 MSAEDIGLVPDQRIESGLTSPIVFQDDPIRFTRVGDPPPKTRELSGFIDDKMFSIDRDRFFSAQGSEFRRSVYGDCSARRDHPDARNWSGNGSTATPSGDESDGDDDEEEDDDDDDDDDVDGDNDVDRLVGVADASKRNSNAIGDINGVANGKGQHHSPYGMRNQEKKIASFNVDILVTSRDMLGKGGDIGQLVHNNACGTDEDHHHRRERLGKSHSAVTIAETDCEEYYSHYLQGGEGSASVHKVMVDENGCGFSGRKDVLYSSESGESLRKILSDPVTGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTSEESISPNLSLRAAVQAYRREEESQFYRSSKRKRERFDQGGFGDSAVIEPPRTRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSKPATTTSKMGPNWR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0678 451 SUPERFAMILY RING/U-box 269 341 - -
Aev08g0678 451 MobiDBLite consensus disorder prediction 343 365 - -
Aev08g0678 451 MobiDBLite consensus disorder prediction 77 159 - -
Aev08g0678 451 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 44 450 - -
Aev08g0678 451 ProSiteProfiles U-box domain profile. 270 342 IPR003613 GO:0004842|GO:0016567
Aev08g0678 451 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 44 450 - -
Aev08g0678 451 MobiDBLite consensus disorder prediction 343 357 - -
Aev08g0678 451 Pfam U-box domain 275 340 IPR003613 GO:0004842|GO:0016567
Aev08g0678 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 340 IPR013083 -
Aev08g0678 451 MobiDBLite consensus disorder prediction 100 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0678 Aev-Chr8 3926351 3929803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0678 215 450 Plant U-box Gene Family AT5G05230 61.157 1.40e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0678 - - adu:107470194 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0678 08 3926351 3929803 Aev08g0678 08 3926351 3929803 ECH