Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0675 ATGGCTCTTCACAATCCTCACCGCCTATTGCTGGAGACAGATTCAAGCTCACAAGCATCAGCAGGTGATGTAAATAGGACAAGGGAATCCTCTTTAGGTGACCCGAATTTCGACACCAACATGGTAATTATCTTGGCTGCTCTGCTTTGTGCACTGATATGTGCATTAGGACTCAACTCAATTGTGCGCTGCGCTCTGAGATGTAGCCGGAGGTTGGCTTTTGAGACGCCGGATGAGGCTGCGGCTCGGTTAGCGGTTAAGGGCCTTAAGAAGAGTGCTCTGCATCAGATTCCTATAGTTGTTTATGGTTCAGGTAGTACTAGTATTGCAGCCACTGAATGTCCAATTTGCTTAGGGGAGTTTATGGATGGTGAGAAAGTTAGAGTGCTACCAAAATGTAACCATGGATTCCATGTAAGGTGCATAGATACATGGCTTCTATCACACTCCTCTTGCCCTACTTGCAGACAATCTTTGCTTGAGCAACCAACCAATTCTCAAGTTCCAACTTTATCTGTTTCTGTTGCTGCTGCTGCTTCAGGAACTAGGCATCATGCTGATGATAATGCATTAGGGGGGCATGAACATAATGAGCATGTAGCAGTAGCTGTGGATGAGATTGGCTAG 627 0.4593 MALHNPHRLLLETDSSSQASAGDVNRTRESSLGDPNFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETPDEAAARLAVKGLKKSALHQIPIVVYGSGSTSIAATECPICLGEFMDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLEQPTNSQVPTLSVSVAAAASGTRHHADDNALGGHEHNEHVAVAVDEIG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0675 208 SUPERFAMILY RING/U-box 113 167 - -
Aev08g0675 208 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 7 175 - -
Aev08g0675 208 Pfam Ring finger domain 113 156 IPR001841 -
Aev08g0675 208 SMART FANCL_C_2 110 169 - -
Aev08g0675 208 SMART ring_2 114 155 IPR001841 -
Aev08g0675 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 166 IPR013083 -
Aev08g0675 208 PANTHER RING-H2 FINGER PROTEIN ATL74 7 175 - -
Aev08g0675 208 CDD RING-H2_PA-TM-RING 113 156 - -
Aev08g0675 208 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0675 Aev-Chr8 3913168 3913794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0675 8 164 C3H Transcription Factor Family AT3G10910 62.500 1.12e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0675 - K19040 gmx:100787273 287.73