Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0652 ATGGGAACTGTTAGTAACATTCGCTTCTCCTCTGTTCTGGGAGCTTCTGTAGATACAGAACTACTCTCAAATCACAGGAGGCACAAATCGCCATGCAGTTTTGTGGTTGTTCCTAGCTACGACCCTGTTCGGTTGAGTCAGATATGTTGTAAGTTATCAGAAAGTGGGATTGAGGAGAACCCCAAAAGCAAGAGGGCCTTCAAATCAAAGGATAGGATGGAAGAGTACAATATAGCTATGAAGAGGATGATGAGGAACCCTTATGAGTATCACCACGATCTGGGTATGAATTACACTCTTATAGCTGATAATTTGATTGTGGGCTCCCAACCACAGAAACCAGAAGACATAGATCACCTCAGAAAGGAAGAGGGTGTGGCATACATTCTGAACTTGCAGCAGGATAAGGATGTTGAATATTGGGGAATAGACTTGCAGTCAATAATACAAAGGTGTCGCGAACTTGAAATTCGCCATATGAGGAGGCCTGCAAAAGACTTCGATCCAAACTCCCTACGAAGTGAACTACCTAAAGCGGTCTCATCATTGGAATGGGCAATTTCAGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCTGGACTTGGCAGAGCTCCGGCTGTGACAATTGCTTATTTGTTCTGGTTTTGCGGCATGAATCTCAATGCAGCATATGATATGCTAACCTCAAAGAGACCTTGTGGACCAAATAAAGGAGCAATACGCGGAGCTACTTACGATTTGGCAAAGAATGATCCATGGAAGGAGCCATTTGAGAGTCTCCCAGATCATGCATTTGAGGATATAGCAGACTGGGAGAGGAACTTGATTCAAAATCGCGTCCGTTCCCTTCGCGGAACATGA 864 0.4421 MGTVSNIRFSSVLGASVDTELLSNHRRHKSPCSFVVVPSYDPVRLSQICCKLSESGIEENPKSKRAFKSKDRMEEYNIAMKRMMRNPYEYHHDLGMNYTLIADNLIVGSQPQKPEDIDHLRKEEGVAYILNLQQDKDVEYWGIDLQSIIQRCRELEIRHMRRPAKDFDPNSLRSELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVTIAYLFWFCGMNLNAAYDMLTSKRPCGPNKGAIRGATYDLAKNDPWKEPFESLPDHAFEDIADWERNLIQNRVRSLRGT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0652 287 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203|GO:0046838
Aev08g0652 287 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 241 IPR029021 -
Aev08g0652 287 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 3 287 - -
Aev08g0652 287 Gene3D Protein tyrosine phosphatase superfamily 80 287 IPR029021 -
Aev08g0652 287 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 287 - -
Aev08g0652 287 Pfam Dual specificity phosphatase, catalytic domain 119 239 IPR000340 GO:0008138|GO:0016311
Aev08g0652 287 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470|GO:0008138
Aev08g0652 287 SMART dsp_5 97 247 IPR020422 GO:0006470|GO:0008138
Aev08g0652 287 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 233 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0652 Aev-Chr8 3745548 3747278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0652 42 287 Protein tyrosine phosphatase (PTP) family AT3G10940 77.733 8.40e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0652 - - gmx:100805592 479.174