Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0648 ATGTCAAGAGAAAGGGAGAGATTTGATGAAATAGGGAAGAAGATAAAGAGGGAAGGAGATCATCATCATCAACATGTTTCGTCTCATCATCAGATGGGGGGGAGAATCAGGCAGAACACTACGCTGGGGCCACCTGGAAGCCTAAACACGATAACGCCGTGTGCAGCGTGTAAGCTTCTTCGGCGAAGATGTGCGCAAGAATGCCCCTTCTCTCCATACTTCTCTCCCCATGAGCCCCAAAAGTTTGCTTCTGTCCACAAAGTGTTTGGTGCTAGCAATGTCTCCAAGATGCTCATGGAGGTACCGGAGATTCAGAGAGCAGATGTTGCAAATAGTCTAGTATACGAGGCAAATGTGAGGCTAAGAGACCCTGTTTATGGATGCATGGGTGCAATCTCTGCTCTGCAGCAACAAGTTCAATCTTTGCAGGCTGACCTCACTGCAATCAGGGCTGAAATACTCAAATACAAACTCAGGGAAGAAGCCAACAATCATATTAACATCATGCCCCCCTCTAATCATCATCATGCTTCATTCATCATTCCTTCCTCTCATGACACTACTGTTTCTATTGCTTCTGCTGCTCCGCCACCTCCACCACCACCGCCGCCTCCTCCTCCACTTTCTTCCATGTACATCCAACAGAGGGCTCCCCCTCCCACCAACTATAGCAGAATTTCAAGTCACAATATTTCTTATTTTACAGACTGA 711 0.4712 MSRERERFDEIGKKIKREGDHHHQHVSSHHQMGGRIRQNTTLGPPGSLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEIQRADVANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQADLTAIRAEILKYKLREEANNHINIMPPSNHHHASFIIPSSHDTTVSIASAAPPPPPPPPPPPPLSSMYIQQRAPPPTNYSRISSHNISYFTD* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0648 236 MobiDBLite consensus disorder prediction 189 236 - -
Aev08g0648 236 ProSiteProfiles LOB domain profile. 52 153 IPR004883 -
Aev08g0648 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 38 234 - -
Aev08g0648 236 MobiDBLite consensus disorder prediction 31 45 - -
Aev08g0648 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 234 - -
Aev08g0648 236 MobiDBLite consensus disorder prediction 13 27 - -
Aev08g0648 236 Coils Coil 132 152 - -
Aev08g0648 236 Pfam Lateral organ boundaries (LOB) domain 53 149 IPR004883 -
Aev08g0648 236 MobiDBLite consensus disorder prediction 13 45 - -
Aev08g0648 236 MobiDBLite consensus disorder prediction 214 236 - -
Aev08g0648 236 MobiDBLite consensus disorder prediction 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0648 Aev-Chr8 3728854 3729757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0648 43 179 AS2 family AT2G40470 83.212 7.43e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev08g0648 LOB 9.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0648 - - lang:109326265 291.582