Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0638 ATGGCGCCGAAGCAGAGAGCACCTAGGGTTACCAGCAGAAACCCTGAATTGATCAGGGGAATCGGGAAATACTCCCGCTCCAAGATGTACCACAAGAGAGGCCTTTGGGCTATCAAGGCCAAGAACGGTGGCACCTTACCTCGCCACGACCCTAAGCCTAAGCCCGAGCCTGCCGCCGAGAAGCCCCCTAAGTTCTACCCTGCTGACGATGTCAAGATCCCGCTCCGCAACAAGCACAAGCCAAAGCCTACCAAGCTCAGGGCTAGCATTACTCCCGGGACCGTGTTGATTCTTCTTGCTGGAAGATTCAAGGGAAAGAGAGTTGTGTTTCTCAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAACCAGTCATATGTTATTGGCACATCCACCAAGGTAGATGTTTCTTCAGTTAACGTGGAGAAATTTGATGACAAGTACTTTGCAAAGGAAGTCCAGAAGAAGAAAAAGAAGGGAGAAGGCGAGTTCTTTGAGGCTGAAAAGGAGGAGAAGAACGTGCTTCCCCAAGAGAAGAAGGATGACCAGAAGACTGTGGATGCTGCTTTGCTCAAAGCCATCGAGAGTGTTCCAGACTTGAAGGCCTACTTGGGTGCGAGGTTTTCCTTGAAGCAGGGCCAGAAGCCCCATGAGTTAGTCTTCTAA 705 0.4993 MAPKQRAPRVTSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGTLPRHDPKPKPEPAAEKPPKFYPADDVKIPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSSVNVEKFDDKYFAKEVQKKKKKGEGEFFEAEKEEKNVLPQEKKDDQKTVDAALLKAIESVPDLKAYLGARFSLKQGQKPHELVF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0638 234 MobiDBLite consensus disorder prediction 45 70 - -
Aev08g0638 234 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Aev08g0638 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aev08g0638 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Aev08g0638 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Aev08g0638 234 Gene3D - 88 172 IPR014722 -
Aev08g0638 234 SUPERFAMILY Translation proteins SH3-like domain 88 178 IPR008991 -
Aev08g0638 234 MobiDBLite consensus disorder prediction 40 70 - -
Aev08g0638 234 CDD KOW_RPL6 82 234 IPR041997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0638 Aev-Chr8 3678505 3679898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0638 1 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 79.487 1.27e-118 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0638 K02934 - gmx:100784101 383.645