Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0622 ATGTCGGCTCTTACATGCACCTCTCTCTCTCACCGACTAGCTCGAAAGTGTTGTGAACCGGCAAAGTTGTTCTCTCCACACACTGGTGCCGGCAAGGTGGCGAATCCAAGAGAGAAAGGAACGAAGGTTGATAATAGGGAATTGGATGAAGGGATAGTTAACAACACCACATTGTCGATGCAAATTATGTTTCCTGGTATGAATAGGGAGAGAGAGATGTCTGCTATGGTTTCAGCTTTGACCCATGTCGTATCCGGAGATGTTCCAAACACAGCTGATGATTATGCAATCAGAGGAGAAGGTGGTGATGACGGTGTTGCTCATGTTGCTACCTCTTCTCTCAAGAGATCTAGGGAAGAAGATTATGCAGCAGGAGGAGGAGGAGGAGTTTCATCCCCTGCAATATTAATTCCAACAATGGCAGTTAATGCAGAGAGTTCAAGCAATTGGGGGACAAGAAGAATAAGAGGAAGTGGCGAAATGGAGAACAGGGGAGTGTATGAATACAGAGCAACAGAGAACGCGAGATCAGAAGAAACAGAGGGAACAAGGAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGTAAATGGGCCGCAGAGATAAGAGACCCATTCAAAGCTGCGAGGGTTTGGTTAGGCACTTTCGACACAGCTGAGGCAGCCGCAAGAGCCTACGACCAAGCTGCACTGCGTTTCAGGGGAAACAAAGCAAAACTCAACTTCCCTGAGAACGTCACTCTCCGCCACCCGCCGCTCAACGCCGCCGCACAATGGAGCGCTGTTTCCACTGCTCCGTCTTCGCTCGCGTCAATTGCTACTTCCACTCCCCCGATAGTTCATACTGAGCCTCTTCGCAATTTGCAGGGTGCTCAGGGTTCGAGTGGATTCTATGGGTATTTTCCTATGAATTTGTATGATGATGATCCGAATCGGATGATTATGGCTTCAACCGTGGCTTCTCATCTTCAATATTCTTCGTCGTCGGCGACACAAGCCTCCATTTCTTCTTCTTCTTCTTCGCAGGGGACATCGCTTCCTTCGTTGTATTCTTTGCAGTTGCCGCCGCCATGGGCAACTTCTGATTATACTTCTTCTTCATCGGGTTAA 1110 0.4856 MSALTCTSLSHRLARKCCEPAKLFSPHTGAGKVANPREKGTKVDNRELDEGIVNNTTLSMQIMFPGMNREREMSAMVSALTHVVSGDVPNTADDYAIRGEGGDDGVAHVATSSLKRSREEDYAAGGGGGVSSPAILIPTMAVNAESSSNWGTRRIRGSGEMENRGVYEYRATENARSEETEGTRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDQAALRFRGNKAKLNFPENVTLRHPPLNAAAQWSAVSTAPSSLASIATSTPPIVHTEPLRNLQGAQGSSGFYGYFPMNLYDDDPNRMIMASTVASHLQYSSSSATQASISSSSSSQGTSLPSLYSLQLPPPWATSDYTSSSSG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0622 369 CDD AP2 186 245 IPR001471 GO:0003700|GO:0006355
Aev08g0622 369 SUPERFAMILY DNA-binding domain 186 244 IPR016177 GO:0003677
Aev08g0622 369 MobiDBLite consensus disorder prediction 331 369 - -
Aev08g0622 369 Gene3D AP2/ERF domain 185 245 IPR036955 GO:0003700|GO:0006355
Aev08g0622 369 PANTHER DNA-BINDING DOMAIN 68 347 IPR044808 GO:0003700|GO:0009873
Aev08g0622 369 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 68 347 - -
Aev08g0622 369 ProSiteProfiles AP2/ERF domain profile. 186 243 IPR001471 GO:0003700|GO:0006355
Aev08g0622 369 SMART rav1_2 186 249 IPR001471 GO:0003700|GO:0006355
Aev08g0622 369 Pfam AP2 domain 186 235 IPR001471 GO:0003700|GO:0006355
Aev08g0622 369 PRINTS Ethylene responsive element binding protein signature 209 225 IPR001471 GO:0003700|GO:0006355
Aev08g0622 369 PRINTS Ethylene responsive element binding protein signature 187 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0622 Aev-Chr8 3576426 3578276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0622 63 285 AP2-EREBP Transcription Factor Family AT5G64750 46.025 1.76e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev08g0622 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0622 - - lang:109338199 279.641