Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0615 ATGGATTTGGACGATTTCCGATCCATATTGGATACGGCGGGGGTCGACGTCTGGCTCTTTATCGACACCGCAATCACCGTCGCGTCGTTGGATTTCGGCGATGAGTTGAGGCGCCGCAGAGACCAAATCGTGGAGCGGCTCTTTCGCGCTACCACGGCTCCTGTGACGTGCCAGAGCTGTGAGGACGATCGAAATCCTAGGTCCAACGGCCTCCAAATCAAGAAGGAGAGCAGCCCTAGCCCTAGCCCTAGCCCTCAACGACCACAACAACACCACCAGCGCCGTGGTGGTGCCGCCGCGTCCCCTGCGACGCCGCAGTCTCTCGGAAACGACAACGCAGACGATGACGAGCTAGATCCTTACGGAGGATTGTTCGATGACGAGCAGAGGAAGATTCTGGAGATTAAAGAGCTGCTCGAAGACCCTGACCAGACTGACGATTCGTTGGTGGATTTGCTACAAAATCTCGCGGACATGGATATTACATTCCAAGCATTGAAGGAGACTGACATTGGAAGGCACGTGAATCGATTACGGAAGCATTCATCCAATGACGTTCGCAGATTGGTGAAGCTACTCGTCAGGAAGTGGAAGGAAATTGTAGACGAGTGGGTGAAGTTGAATCAACCCGGTGGTGGAACAACTTCTCTCATGGCTGATGGAGACTCTCCTCCTCTGAAAACCACCCAAAACGGGCATCATCAGATTCCTGATTTTGCATACTCGCCAAATCCACACAATGGTAGTTCTGGGTCTGACCGTAACACCTCCTCAGAAGCAGAACCAAAACCAAAAGTGATTCCTCGCAAAGAAGCTCCGCCAAAACCAACGCCGCCACCCTCAGTCCCTACCCCTGCTTCCGCTACTCAAAACAGACAGAGAGAACAGAGAGAGACCAATTTTGACGCGGAGAGGCTTGCTTCGGCAAGGAAGCGGCTTCAAGAGAACTACAAGGAGGCTGAAAATGCGAAAAAGCAAAGAACGATTCAGGTGATGGACATCCATGAGTTGCCAAAGTCAAAACCCAAGAATGGCTTCTTTGGAAAGAACAAAGGTGGCGGCGGTTCTCAGGGAAGGCACTGGTGA 1086 0.523 MDLDDFRSILDTAGVDVWLFIDTAITVASLDFGDELRRRRDQIVERLFRATTAPVTCQSCEDDRNPRSNGLQIKKESSPSPSPSPQRPQQHHQRRGGAAASPATPQSLGNDNADDDELDPYGGLFDDEQRKILEIKELLEDPDQTDDSLVDLLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVDEWVKLNQPGGGTTSLMADGDSPPLKTTQNGHHQIPDFAYSPNPHNGSSGSDRNTSSEAEPKPKVIPRKEAPPKPTPPPSVPTPASATQNRQREQRETNFDAERLASARKRLQENYKEAENAKKQRTIQVMDIHELPKSKPKNGFFGKNKGGGGSQGRHW* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0615 361 MobiDBLite consensus disorder prediction 209 257 - -
Aev08g0615 361 MobiDBLite consensus disorder prediction 57 123 - -
Aev08g0615 361 Pfam TFIIS helical bundle-like domain 152 201 IPR017923 -
Aev08g0615 361 MobiDBLite consensus disorder prediction 295 342 - -
Aev08g0615 361 MobiDBLite consensus disorder prediction 208 361 - -
Aev08g0615 361 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 361 - -
Aev08g0615 361 SMART TFS2_5 132 203 IPR003617 GO:0005634
Aev08g0615 361 CDD TFIIS_I 132 202 - -
Aev08g0615 361 ProSiteProfiles TFIIS N-terminal domain profile. 127 204 IPR017923 -
Aev08g0615 361 MobiDBLite consensus disorder prediction 271 285 - -
Aev08g0615 361 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 361 IPR044790 -
Aev08g0615 361 MobiDBLite consensus disorder prediction 57 80 - -
Aev08g0615 361 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 126 211 IPR035441 -
Aev08g0615 361 Coils Coil 303 330 - -
Aev08g0615 361 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 130 213 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0615 Aev-Chr8 3528812 3530911 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aev08g0615 Med26 3.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0615 - - aip:107622503 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0615 08 3528812 3530911 Aev08g0615 08 3528812 3530911 ECH
Aev03g2879 03 28212860 28214728 Aev08g0615 08 3528812 3530911 ECH
Aev03g2879 03 28212860 28214728 Aev08g0615 08 3528812 3530911 PCT