Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0610 ATGCTGGAAAACTCAACTTTACCGGAAAATCCGACGGAGAAAACCGCGCAGGCGGTGAGTGATGGCGGCAGTCCCGGCGGCGATGGGTTGAAAGGGCAGCAGCAGGGAGAAGACGGTGACCGGAATAGCGGCATCAACCGGTGGCCCCGCGACGAGACAATGGCTTTGCTGAAGATAAGGTCAGAAATGGACGCAGCTTTCAGGGATGTCAGCCCTAAAGCCCCTCTTTGGGAACAAATCTCAAGGAAATTAGCGGAGTTGGGGTATAATAGAAGTGCGAAGAAGTGTAAGGAGAAGTTTGAGAATATTCACAAGTACTATAGGAGAACCAAGGAAGGTCGTTCAGGGAAAACGCCCAACGGAAAAACTTACCGGTTCTTTGAGCAAATGGAAGCCTTAAACCCACACCCAATAACATCAGCAGCAGCAGCAACAGCCATTGTTCCTAGCAACGGTGTTCATGTTATTCAAGATGCGGTTCCTTGTTCCATAGTTAGGTTCCCAAATAGTGCAAATAATATGGCTGATATTTCCACCAGTTCGGCCACCACTTCCTCTTCAAGCAAAGGCTCAGGGGAAGGGAAGAAGAATGATAAGAAGAGGAGGGTCACGCAGTTCTTTGAGGGTTTGATGAGGGAGGTCATAGAGAAGCAAGAGACCCTGCAGAGGAAGTTCATGGAAGTGTTGGAGAAATGCGAGCAGGAACGAATGGCAAGAGAACAGGCATGGAAAACAGAAGAATTGGCTCGGATTAAGAGGGAGAGAGAGCTTCTTGCTCAGGAAAGGTCTATTGCTGCGGCAAAGGATGAAGCTGTTCTTGCCTTCCTCAGGAAATTCGCAGAGAACAATGGCACCCTGCACTTTCCAGAGAAAACAACACAGATTCCTATTCCACATGATAAAGACAAAGACACAGAGAAAGACAGGGGCATGCAAGAAGGTGTTGTTGACAAGGACAATGATAAGGATAAGCAAGAGTGTGGAAATAATGCTATTAGTGTTGGGAATTTTGTACACATGAGCTCTTCTCGGTGGCCTAAGGATGAAGTTGAAGCTTTGATTCGGTTGAGGACACAGCTTGATGTGCAGCACCAAGGGAATGTCTCTAATAAGGGTCCTCTTTGGGAGGAGATTTCTTCTGCAATGAAGGGGCTTGGCTATGATCGAAGTGCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAAGAGGATGAAGGAGAAGAACAAGAGGAAACCAGAGGATTCAAAGACATGCCCCTATTACCACCACCTCGAAGCTCTATACAGCAAAAAGCCTAGGAATAAGGTTGATGAATCCGGTGGTTCTTCTGGGAATGAGTTGAAGCCTGAGGAACTGTTGATGCATATCATGGGTAGTGGTCAAGATCAGGAAGAGAAACAACAACAGCAGATAGAGTCTTCTTCTGAAGATGCAGAGAGAGAGAACACAGATCAGAATAATGAAGATGGGTTGGCTCAACAGGAGCATAGCATGTCAATTGCTGGTCTTGGTAGAATGCAAAACAAAATGAACCAATCTCAAGTCAGGAGCAGCGTTCCTGTTCTCAGCACAACCACCATGGCAGACTATGAAGGTGCGCACCAGCAGCACCACCATCACCACCAACAAGTTATTTCGAAAGAGACAGCATTCCAAGCTTTGAACACCATCATACAGCTCCATTTCGAGAAGACCCTCGAGAAGAAGCGTGCCATAGACCTCCAGAAGAAGGAGCTCCACAAGCTCTTCCAGATTTTCTTCGTCTTCCTTGGCCTCGTTTTCATGGCACAGTCACAGTCACAGCGCCTCCAATGCCGCCACTGTTGGATCCCCATCACGCTCCTCTCCATGGCCCACCTCATCTTCTACGTCTCCGTTGCTCAGACCTTGAGGTGCATCAACGGCTTCAAGTACCAGAGGAGGTGCCACAAGCTTACCCTAGGTTTGGCAACGGAGAAGCTGAGGGAGATGAAGATGAGGCTCAGCAGCAGCAATAATGGCGGCGACTATGATGGGATCGGTGATGAGGAGTTCGAGATTCACTACCAGGAACCCCCTGAGAGCTATTTTGGCAAGTTCAAGAGGAATTGGGCACTCCATTTTGGGTTCTTGATCCTGATCTATGGCTTTATGATCTCTTCCTCTGTTGTTCTCCTCTGTTTTTAG 2178 0.478 MLENSTLPENPTEKTAQAVSDGGSPGGDGLKGQQQGEDGDRNSGINRWPRDETMALLKIRSEMDAAFRDVSPKAPLWEQISRKLAELGYNRSAKKCKEKFENIHKYYRRTKEGRSGKTPNGKTYRFFEQMEALNPHPITSAAAATAIVPSNGVHVIQDAVPCSIVRFPNSANNMADISTSSATTSSSSKGSGEGKKNDKKRRVTQFFEGLMREVIEKQETLQRKFMEVLEKCEQERMAREQAWKTEELARIKRERELLAQERSIAAAKDEAVLAFLRKFAENNGTLHFPEKTTQIPIPHDKDKDTEKDRGMQEGVVDKDNDKDKQECGNNAISVGNFVHMSSSRWPKDEVEALIRLRTQLDVQHQGNVSNKGPLWEEISSAMKGLGYDRSAKRCKEKWENINKYFKRMKEKNKRKPEDSKTCPYYHHLEALYSKKPRNKVDESGGSSGNELKPEELLMHIMGSGQDQEEKQQQQIESSSEDAERENTDQNNEDGLAQQEHSMSIAGLGRMQNKMNQSQVRSSVPVLSTTTMADYEGAHQQHHHHHQQVISKETAFQALNTIIQLHFEKTLEKKRAIDLQKKELHKLFQIFFVFLGLVFMAQSQSQRLQCRHCWIPITLLSMAHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATEKLREMKMRLSSSNNGGDYDGIGDEEFEIHYQEPPESYFGKFKRNWALHFGFLILIYGFMISSSVVLLCF* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0610 725 CDD GT1 343 409 - -
Aev08g0610 725 MobiDBLite consensus disorder prediction 289 327 - -
Aev08g0610 725 MobiDBLite consensus disorder prediction 178 200 - -
Aev08g0610 725 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 1 498 - -
Aev08g0610 725 ProSiteProfiles Myb-like domain profile. 343 402 IPR001005 -
Aev08g0610 725 SUPERFAMILY Homeodomain-like 342 420 IPR009057 -
Aev08g0610 725 SMART 118neu2 55 138 IPR006578 -
Aev08g0610 725 SMART 118neu2 352 436 IPR006578 -
Aev08g0610 725 MobiDBLite consensus disorder prediction 1 50 - -
Aev08g0610 725 Pfam Myb/SANT-like DNA-binding domain 46 133 IPR044822 -
Aev08g0610 725 Pfam Myb/SANT-like DNA-binding domain 343 431 IPR044822 -
Aev08g0610 725 MobiDBLite consensus disorder prediction 1 19 - -
Aev08g0610 725 Gene3D - 48 109 - -
Aev08g0610 725 Gene3D - 345 407 - -
Aev08g0610 725 CDD GT1 46 111 - -
Aev08g0610 725 Coils Coil 465 492 - -
Aev08g0610 725 SMART sant 44 106 IPR001005 -
Aev08g0610 725 SMART sant 341 404 IPR001005 -
Aev08g0610 725 MobiDBLite consensus disorder prediction 473 490 - -
Aev08g0610 725 MobiDBLite consensus disorder prediction 463 496 - -
Aev08g0610 725 ProSiteProfiles Myb-like domain profile. 46 104 IPR001005 -
Aev08g0610 725 PANTHER - 1 498 - -
Aev08g0610 725 MobiDBLite consensus disorder prediction 294 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0610 Aev-Chr8 3495230 3500198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0610 43 439 Trihelix Transcription Factor Family AT1G76890 44.068 5.33e-112 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev08g0610 Myb_DNA-bind_4 1.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0610 - - aip:107623117 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0610 08 3495230 3500198 Aev08g0610 08 3495230 3500198 ECH