Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0608 ATGGCAGATGGTGAGGATATTCAGCCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAGGCAGGATTTGCTGGTGATGATGCTCCTAGAGCTGTTTTTCCTAGTATTGTTGGCAGACCCCGCCATACCGGTGTGATGGTTGGGATGGGTCAAAAGGATGCCTATGTAGGTGATGAAGCCCAATCTAAAAGAGGTATTCTTACTCTGAAATACCCCATTGAGCATGGTATAGTCAGCAACTGGGATGACATGGAAAAGATCTGGCATCACACATTTTACAATGAATTGCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTAACTGAGGCTCCCCTCAACCCGAAGGCCAACAGAGAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCCCTGTATGCAAGTGGTCGTACAACTGGTATTGTCTTGGACTCTGGTGATGGTGTGAGTCACACTGTGCCAATCTATGAGGGGTATGCACTCCCACATGCCATCCTTCGATTGGATCTTGCAGGCCGTGACCTGACTGATTCTTTGATGAAGATCCTCACAGAGAGAGGATACATGTTCACCACCTCAGCTGAGCGGGAAATTGTCCGTGACATAAAGGAGAAGCTTGCATATGTTGCCTTAGATTATGAGCAAGAACTTGAGACTGCAAAGAGCAGCTCCTCAATTGAGAAAAACTATGAGCTTCCAGATGGACAAGTAATCACAATTGGAGCCGAGAGATTCCGTTGCCCAGAAGTTCTTTTCCAGCCATCCATGATTGGAATGGAAGCTGCTGGAATTCATGAGACTACCTACAACTCTATCATGAAGTGTGATGTGGATATCAGAAAGGATTTGTATGGCAACATTGTTCTCAGTGGTGGCTCAACTATGTTCCCTGGCATTGCTGACCGTATGAGCAAGGAGATCACTGCCCTTGCTCCTAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGAGAGAAAGTACAGTGTCTGGATTGGAGGGTCAATCCTTGCTTCCCTCAGCACCTTCCAGCAGATGTGGATATCCAAGGGTGAATATGACGAATCTGGCCCATCCATCGTCCACAGGAAGTGCTTCTAA 1134 0.4744 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0608 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Aev08g0608 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Aev08g0608 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Aev08g0608 377 Pfam Actin 5 377 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 51 62 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 63 85 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 142 161 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 28 37 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 117 130 IPR004000 -
Aev08g0608 377 PRINTS Actin signature 238 254 IPR004000 -
Aev08g0608 377 PANTHER BNAC02G00690D PROTEIN 1 376 - -
Aev08g0608 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Aev08g0608 377 SMART actin_3 7 377 IPR004000 -
Aev08g0608 377 Gene3D - 10 371 - -
Aev08g0608 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Aev08g0608 377 Gene3D - 140 340 - -
Aev08g0608 377 PANTHER ACTIN 1 376 IPR004000 -
Aev08g0608 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Aev08g0608 377 Gene3D Actin; Chain A, domain 4 182 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0608 Aev-Chr8 3487059 3488457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0608 1 377 Cytoskeleton Gene Families AT5G09810 98.674 0.0 776