Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0603 ATGAGTATGGTGGGTGCAGAAAGCTCAGAGGAGGGTATTGGGCATCCAGAGCCTCCTGATCCTGATGTGCTTGAAATTGATCCTACTGGTCGCTACATCAGGTACAAAGAAATTCTCGGCAAAGGAGCTTTCAAGACTGTCTACAAGGCATTTGATGAAGACAATGGACTTGAAGTTGCGTGGAGCCAAGTTATGATCGATGAAGTATTACAGTCGCCTGGCGACTTAGAGAGGCTGTACTCGGAGGTGCGCCTCTTGAAGTCGGTGGAACACGACAACATAATAAGGTTCTACAATTCTTGGATTGATGACAAACACAGGACTGTTAACATGATTACAGAGCTTTTCTCCTCGGGGAGCCTCAGACAGTTCAGTAAGAAACACAAGAAGTTCAACATGAAGGCTATTAAAGAATGGGCAAGACAGATTTTAACTGGTTTAAACTACCTTCATAGTCACAACCCCCCAATTTTACATAGGGATCTCAAGTGTGATAACATATTTATAAATGGCCACCTAGGTCAAGTTAAAATTGGAGATTTGGGGCTAGCAACTCTCTTGGAGCAGAGGAATGCCAAGACCGTAATTGGAACTCCGGAGTTTATGGCACCTGAGTTGTATGATGAAAACTATAATGAATTGGCTGACATATATTCATTTGGGATGTGTATGCTTGAATTGGTGACTTCTGAGTATCCTTATAGTGAATGTAGAAATTCTGCTCATATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCTAAAATCAAAGATCCAGAAGTAAAATCTTTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGCCAGCAATGGAACTTCTGAATGACCCTTTTCTCCAAGTGAATAGTTTCGCTAAAAGTCGCCGCCTTTCGCTACCAGATATTGTTTTTCCGAAATTTGGAGCATTTGAAGATCGTTGTCTGATGTCAGAAGGTCCTGCTAGCATTAGCATGCGTCCAGGATCCATTTCAATGGATCTTGGTGGCTCGAGTGAGCTACTAATAACCACTATATCTTATAACTCAGTTGACGATGCAAAACCTTATCCGGGTGTTGAGATACGAAGGTTGAAGGGAGTTGATATGTTTTTTCTAAAAGGTGAACAAAATGATGAGAATTCTGTGTCGTTAGTTCTCCGAATTGCTGATCAAAGTGGTCGGGCAAGAAATATCCATTTTATATTCTACCTCAATAGTGATACTGCCATTTCAGTTTCTGGTGAAATGGTAGAGCAACTTGAACTTGCCGAGCAGAATGTTAAATTCATAGCTGAGTTAATAGATCTGCTATTGGCAACTTTGCTTCCTAATTGGAAGCCTTGTGTTGCAATCGATCATTTGATTTCTTCAAATGCTAAACAAACTTGTCTGAGCCAACAAAACCACTCAAGGTTGACGACACATAAAACCATGTCCAAAGGTCCTAGCCAAATTGTGGCAGAAGATGCAGGTCCTTCAACATCTCCTGGAAAATCATCGCAGAGAGAAAACCATGATGATATGACTTTTGACGAGGAATTATCTCACACGAGCATTGGCCTTCGAAAAGCAACAAAGACATACGATTCGCGTCGCGGGATGTCAAATACTTCTGCATCATCTGAGTTCAATGATCACCATTTTTCTGCAGCTTCATTCATGTCTGCTGAATCAAGTTTTACAGACTTCAGCTTACTTAGAGTAAACAGAGGGAGTCAAACCTCATTTGCATCTGAGATTGATGCATTGTCTTCTTATGGAAGCAAGTTTCCAGACATGGAAAGCAATAATGGTATGGTGAACTCTTCTAATCATCTTATCTCTGCTTCCTCCTTGTCCGAAGATGAGATGAGAAAAGAGTTAGAAATGATTGACCATAAATATCAAGAGGCAATCAAAGATATATCCAGAAGGAGATACCAAGCCATCATGGACACTAGAAGGAGGCGATCACAGAATATGATGTCGTCATAG 1986 0.4079 MSMVGAESSEEGIGHPEPPDPDVLEIDPTGRYIRYKEILGKGAFKTVYKAFDEDNGLEVAWSQVMIDEVLQSPGDLERLYSEVRLLKSVEHDNIIRFYNSWIDDKHRTVNMITELFSSGSLRQFSKKHKKFNMKAIKEWARQILTGLNYLHSHNPPILHRDLKCDNIFINGHLGQVKIGDLGLATLLEQRNAKTVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAHIYKKVSSGIKPVALSKIKDPEVKSFIEKCLVPASQRLPAMELLNDPFLQVNSFAKSRRLSLPDIVFPKFGAFEDRCLMSEGPASISMRPGSISMDLGGSSELLITTISYNSVDDAKPYPGVEIRRLKGVDMFFLKGEQNDENSVSLVLRIADQSGRARNIHFIFYLNSDTAISVSGEMVEQLELAEQNVKFIAELIDLLLATLLPNWKPCVAIDHLISSNAKQTCLSQQNHSRLTTHKTMSKGPSQIVAEDAGPSTSPGKSSQRENHDDMTFDEELSHTSIGLRKATKTYDSRRGMSNTSASSEFNDHHFSAASFMSAESSFTDFSLLRVNRGSQTSFASEIDALSSYGSKFPDMESNNGMVNSSNHLISASSLSEDEMRKELEMIDHKYQEAIKDISRRRYQAIMDTRRRRSQNMMSS* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0603 661 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0603 661 Gene3D - 384 480 - -
Aev08g0603 661 CDD STKc_WNK 31 290 - -
Aev08g0603 661 SUPERFAMILY Protein kinase-like (PK-like) 34 338 IPR011009 -
Aev08g0603 661 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 3 659 - -
Aev08g0603 661 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 659 - -
Aev08g0603 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Aev08g0603 661 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Aev08g0603 661 MobiDBLite consensus disorder prediction 470 485 - -
Aev08g0603 661 MobiDBLite consensus disorder prediction 504 520 - -
Aev08g0603 661 MobiDBLite consensus disorder prediction 470 520 - -
Aev08g0603 661 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Aev08g0603 661 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0603 661 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0603 661 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0603 Aev-Chr8 3465229 3467955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0603 133 473 MAP Kinase Kinase Kinase AT1G49160 66.569 1.85e-159 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aev08g0603 Pkinase 1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0603 K08867 - gmx:121175054 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0603 08 3465229 3467955 Aev08g0603 08 3465229 3467955 ECH
Aev03g2892 03 28273947 28276803 Aev08g0603 08 3465229 3467955 PCT