Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0602 ATGGTGAGAGACGATCTATGCATCAGTATTCCCAGCTACTTCAAATGCCCTATCTCCCTCGACGTCATGAAATCCCCTGTCAGCCTCTGCACCGGAGTCACCTACGACCGCTCCTGCATCCAACGCTGGCTTGACGGCGGCAACAACACCTGCCCCGCTACCATGCAGCCCCTTCATACTAAGGACTTCGTTCCTAACCGTACTTTGCACAGTCTCATCCGGATCTGGTCTGACTCCGTCGCCCACCGACTCCACTCGCCCCCTTCCAAATCCCTCCCTTCCGAGCACCAGGTCCTTCAAGCCATCGCCGAATTGGAATCCCGCACCGATAATCTTTCCGATTCTCTCGCCAAAGTTATTCGTTTCGCTGAGGACTCTCGGGAGAACAGAGTGTTCCTCGCGAAATTGAATCGCTTCGTTGCCGTGATCGTTGGTTTCCTCGCCAATGCCGGCGCTGGAGAAACCGGGAGCGTTGAGTTTCTAGGAAAAGCTGTGACGGCGTTAGGCTTGGTAATGGAGAAAATCGAAGATCGCGAGGGACTGAAAAACTCAATGCTCAAGGCACACAGGCAGGGGAACTGCTTGGATTCTCTGCTTCTCGTTCTGCGAAACGGAAGCGTCGATTCGAGGATTGCCACGGCTAGGGTTCTGACATTCATCGCCATGGATTCGGAGTCAAAGCTCTTGATCGCTGAGAAGGAAGGCTTGGTAACCGAATTGCTTAATTTAGCGTCGCCGGAGAAAGACCCAGCGCTGATGGAGAACGCCTTGTCGGCCTTGGTGGCAATCACAACGCCGAAACGGAATAAGTTGAAGCTAGTTAGCGTCGGAGCGATCGAGAGGCTCTCGAAGCTTCTATCGGTGCCGAAATTAAGCGCATCGGTGGTGGAGAAGGTGCTAAAGCTGGTGGAAGCGGCGTCGTCAACGAGGGAAGGGAGGAAGGAAATATGCGAGGACAGGGCGTGCGTGACGGCGGTGCTGAGCAAGTCGATGAAGGTGTCAAGCGCGGCGACGGAGCACGCGGTGACAACGCTGTGGAGCGTGTGTTATCTGTTTAGGGATGGGAAGGCAGAAGAAGCGGTTACGAAGGCTAACGGATTGACGAAGATTCTGTTACTGATGCAGAGCAATTGTTCCCCAACAGTGCGCCAAATGTGCGTCGATTTGCTCAAAATATTTCGTGTTAACTCCAAATCATGCCTTCCTTGCTACGACACCAACACCACCCATATCATGCCCTTTTGA 1245 0.5357 MVRDDLCISIPSYFKCPISLDVMKSPVSLCTGVTYDRSCIQRWLDGGNNTCPATMQPLHTKDFVPNRTLHSLIRIWSDSVAHRLHSPPSKSLPSEHQVLQAIAELESRTDNLSDSLAKVIRFAEDSRENRVFLAKLNRFVAVIVGFLANAGAGETGSVEFLGKAVTALGLVMEKIEDREGLKNSMLKAHRQGNCLDSLLLVLRNGSVDSRIATARVLTFIAMDSESKLLIAEKEGLVTELLNLASPEKDPALMENALSALVAITTPKRNKLKLVSVGAIERLSKLLSVPKLSASVVEKVLKLVEAASSTREGRKEICEDRACVTAVLSKSMKVSSAATEHAVTTLWSVCYLFRDGKAEEAVTKANGLTKILLLMQSNCSPTVRQMCVDLLKIFRVNSKSCLPCYDTNTTHIMPF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0602 414 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Aev08g0602 414 PANTHER WDSAM1 PROTEIN 4 414 IPR045185 GO:0061630
Aev08g0602 414 SUPERFAMILY ARM repeat 185 404 IPR016024 -
Aev08g0602 414 Pfam U-box domain 10 77 IPR003613 GO:0004842|GO:0016567
Aev08g0602 414 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 27-RELATED 4 414 - -
Aev08g0602 414 SUPERFAMILY RING/U-box 6 78 - -
Aev08g0602 414 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
Aev08g0602 414 CDD RING-Ubox_PUB 14 56 IPR045210 -
Aev08g0602 414 Gene3D - 75 397 IPR011989 -
Aev08g0602 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 74 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0602 Aev-Chr8 3455371 3456615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0602 1 414 U-box Gene Family AT5G09800 53.606 2.39e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0602 - - gmx:100799627 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2894 03 28307172 28308434 Aev08g0602 08 3455371 3456615 PCT